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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180011342
FLSK01001550
464163
Bacillota
CTT
Lys
>WENV180011533
FLSK01003556
464163
Bacillota
CTT
Lys
>WENV180012275
FLSK01321202
464163
Bacillota
CTT
Lys
>WENV180012366
FLSK01376754
464163
Bacillota
CTT
Lys
>WENV180011268
FLSK01000567
182231
Bacillota
TAG
Leu
>WENV180011355
FLSK01001999
182231
Bacillota
TAG
Leu
>WENV180011356
FLSK01001999
182231
Bacillota
TAG
Leu
>WENV180011554
FLSK01004333
182231
Bacillota
TAG
Leu
>WENV180011250
FLSK01000349
31227
Bacillota
GCT
Ser
>WENV180011844
FLSK01060713
31227
Bacillota
GCT
Ser
>WENV180012343
FLSK01376483
31227
Bacillota
GCT
Ser
>WENV180011649
FLSK01013949
660193
Bacillota
GCA
Cys
>WENV180011993
FLSK01121828
660193
Bacillota
GCA
Cys
>WENV180012085
FLSK01166942
464159
Bacillota
GGT
Thr
>WENV180012078
FLSK01164271
451585
Bacillota
CCA
Trp
>WENV180011515
FLSK01003294
282520
Bacillota
TCT
Arg
>WENV180011559
FLSK01004536
282520
Bacillota
TCT
Arg
>WENV180011566
FLSK01005232
282520
Bacillota
TCT
Arg
>WENV180011592
FLSK01006462
282520
Bacillota
TCT
Arg
>WENV180011924
FLSK01094423
282520
Bacillota
TCT
Arg
>WENV180011228
FLSK01000091
466746
Bacillota
GAA
Phe
>WENV180011991
FLSK01121828
466746
Bacillota
GAA
Phe
>WENV180012363
FLSK01376731
466746
Bacillota
GAA
Phe
>WENV180011583
FLSK01006139
660225
Bacillota
CAT
Met
>WENV180012105
FLSK01188238
273884
Bacillota
GAT
Ile
>WENV180011876
FLSK01076321
455002
Bacillota
GTC
Asp
>WENV180011978
FLSK01119830
455002
Bacillota
GTC
Asp
>WENV180011907
FLSK01087902
464162
Bacillota
GTG
His
>WENV180012325
FLSK01371277
455113
Bacillota
CTT
Lys
>WENV180011235
FLSK01000156
464161
Bacillota
TAC
Val
>WENV180011313
FLSK01001344
464161
Bacillota
TAC
Val
>WENV180011883
FLSK01077650
464161
Bacillota
TAC
Val
>WENV180012084
FLSK01166942
464274
Bacillota
CAT
Met
>WENV180011878
FLSK01076321
462734
Bacillota
TGT
Thr
>WENV180011980
FLSK01119830
462734
Bacillota
TGT
Thr
>WENV180011244
FLSK01000241
73370
Bacillota
TGA
Ser
>WENV180011296
FLSK01001162
73370
Bacillota
TGA
Ser
>WENV180012159
FLSK01221221
73370
Bacillota
TGA
Ser
>WENV180011725
FLSK01028760
456820
Bacillota
CCA
Trp
>WENV180012029
FLSK01136557
182209
Bacillota
GTA
Tyr
>WENV180012083
FLSK01166942
182209
Bacillota
GTA
Tyr
>WENV180012272
FLSK01319975
658733
Bacillota
GCC
Gly
>WENV180011227
FLSK01000091
451472
Bacillota
GTC
Asp
>WENV180011652
FLSK01014426
451472
Bacillota
GTC
Asp
>WENV180011673
FLSK01018235
451472
Bacillota
GTC
Asp
>WENV180011969
FLSK01118010
451472
Bacillota
GTC
Asp
>WENV180011990
FLSK01121828
451472
Bacillota
GTC
Asp
>WENV180012362
FLSK01376731
451472
Bacillota
GTC
Asp
>WENV180011922
FLSK01094423
282519
Bacillota
TGG
Pro
>WENV180011729
FLSK01030031
155259
Bacillota
CAG
Leu
>WENV180011909
FLSK01087902
464269
Bacillota
TTT
Lys
>WENV180012082
FLSK01166942
464273
Bacillota
TGT
Thr
>WENV180011657
FLSK01015353
218534
Bacillota
CAA
Leu
>WENV180012277
FLSK01321886
218534
Bacillota
CAA
Leu
>WENV180012378
FLSK01376819
218534
Bacillota
CAA
Leu
>WENV180011650
FLSK01013949
73496
Bacillota
TAA
Leu
>WENV180012251
FLSK01296341
281604
Bacillota
GGG
Pro
>WENV180011249
FLSK01000342
31240
Bacillota
CGA
Ser
>WENV180011630
FLSK01010399
31240
Bacillota
CGA
Ser
>WENV180011726
FLSK01028760
282517
Bacillota
ACG
Arg
>WENV180011768
FLSK01041779
282517
Bacillota
ACG
Arg
>WENV180011648
FLSK01013949
660224
Bacillota
GCC
Gly
>WENV180011937
FLSK01100721
660224
Bacillota
GCC
Gly
>WENV180011992
FLSK01121828
660224
Bacillota
GCC
Gly
>WENV180011908
FLSK01087902
660227
Bacillota
TTG
Gln
>WENV180011685
FLSK01020493
271695
Bacillota
TCT
Arg
>WENV180011923
FLSK01094423
779402
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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