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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170646665
JQIA01001215
179970
Gammaproteobacteria
CAA
Leu
>WENV170647489
JQIA01031167
474520
Gammaproteobacteria
CCA
Trp
>WENV170647455
JQIA01028072
455942
Gammaproteobacteria
GCC
Gly
>WENV170646743
JQIA01002531
467367
Gammaproteobacteria
GGT
Thr
>WENV170647469
JQIA01029384
460422
Gammaproteobacteria
TAC
Val
>WENV170646754
JQIA01002728
276976
Gammaproteobacteria
TCT
Arg
>WENV170646787
JQIA01003155
780592
Gammaproteobacteria
CCC
Gly
>WENV170647277
JQIA01018658
452412
Gammaproteobacteria
GCC
Gly
>WENV170647570
JQIA01037071
452412
Gammaproteobacteria
GCC
Gly
>WENV170647318
JQIA01020467
458525
Gammaproteobacteria
TAC
Val
>WENV170646605
JQIA01000244
49705
Gammaproteobacteria
GGA
Ser
>WENV170647356
JQIA01022152
457459
Gammaproteobacteria
GGC
Ala
>WENV170646685
JQIA01001441
453897
Gammaproteobacteria
TAC
Val
>WENV170647331
JQIA01021374
454397
Gammaproteobacteria
TGT
Thr
>WENV170647040
JQIA01008631
456267
Gammaproteobacteria
GAA
Phe
>WENV170647138
JQIA01012884
454091
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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