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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170646605
JQIA01000244
53397
Gammaproteobacteria
GGA
Ser
>WENV170646649
JQIA01000753
542360
Gammaproteobacteria
GAA
Phe
>WENV170646665
JQIA01001215
203957
Gammaproteobacteria
CAA
Leu
>WENV170646685
JQIA01001441
507541
Gammaproteobacteria
TAC
Val
>WENV170646743
JQIA01002531
514321
Gammaproteobacteria
GGT
Thr
>WENV170646754
JQIA01002728
310413
Gammaproteobacteria
TCT
Arg
>WENV170646794
JQIA01003301
208171
Gammaproteobacteria
CAA
Leu
>WENV170646819
JQIA01003825
526797
Gammaproteobacteria
GAA
Phe
>WENV170646900
JQIA01005540
876343
Gammaproteobacteria
GCA
Cys
>WENV170647018
JQIA01008233
509612
Gammaproteobacteria
TTC
Glu
>WENV170647017
JQIA01008233
544296
Gammaproteobacteria
GGC
Ala
>WENV170647040
JQIA01008631
508622
Gammaproteobacteria
GAA
Phe
>WENV170647100
JQIA01010707
520673
Gammaproteobacteria
TAC
Val
>WENV170647138
JQIA01012884
509784
Gammaproteobacteria
GGC
Ala
>WENV170647204
JQIA01015955
743157
Gammaproteobacteria
TTG
Gln
>WENV170647240
JQIA01017256
311351
Gammaproteobacteria
CAT
Met
>WENV170647325
JQIA01020751
25828
Gammaproteobacteria
TGA
Ser
>WENV170647329
JQIA01021178
547925
Gammaproteobacteria
TAC
Val
>WENV170647331
JQIA01021374
512941
Gammaproteobacteria
TGT
Thr
>WENV170647356
JQIA01022152
511604
Gammaproteobacteria
GGC
Ala
>WENV170647389
JQIA01024626
872117
Gammaproteobacteria
GCA
Cys
>WENV170647455
JQIA01028072
512454
Gammaproteobacteria
GCC
Gly
>WENV170647469
JQIA01029384
521659
Gammaproteobacteria
TAC
Val
>WENV170647489
JQIA01031167
513099
Gammaproteobacteria
CCA
Trp
>WENV170647575
JQIA01037305
513927
Gammaproteobacteria
CCA
Trp
>WENV170647589
JQIA01039005
547925
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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