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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170653507
JRYJ01002963
780573
Betaproteobacteria
TCC
Gly
>WENV170653460
JRYJ01001430
30774
Betaproteobacteria
GGA
Ser
>WENV170653459
JRYJ01001424
454902
Betaproteobacteria
CGC
Ala
>WENV170653443
JRYJ01000977
463660
Betaproteobacteria
CCA
Trp
>WENV170653429
JRYJ01000710
477700
Betaproteobacteria
GCC
Gly
>WENV170653431
JRYJ01000710
477700
Betaproteobacteria
GCC
Gly
>WENV170653402
JRYJ01000014
282056
Betaproteobacteria
CAT
Met
>WENV170653508
JRYJ01003066
288758
Betaproteobacteria
TTG
Gln
>WENV170653558
JRYJ01005908
273219
Betaproteobacteria
TCT
Arg
>WENV170653553
JRYJ01005672
454252
Betaproteobacteria
CGC
Ala
>WENV170653421
JRYJ01000531
457606
Betaproteobacteria
TTT
Lys
>WENV170653583
JRYJ01008890
282032
Betaproteobacteria
GGG
Pro
>WENV170653673
JRYJ01032866
469156
Betaproteobacteria
CGT
Thr
>WENV170653636
JRYJ01021337
780210
Betaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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