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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170679774
LFCJ01000385
273856
Gammaproteobacteria
GAC
Val
>WENV170679775
LFCJ01000385
273856
Gammaproteobacteria
GAC
Val
>WENV170680037
LFCJ01002899
271252
Gammaproteobacteria
CAT
Met
>WENV170680044
LFCJ01002899
271252
Gammaproteobacteria
CAT
Met
>WENV170679604
LFCJ01000070
274209
Gammaproteobacteria
ACG
Arg
>WENV170679605
LFCJ01000070
274209
Gammaproteobacteria
ACG
Arg
>WENV170680041
LFCJ01002899
456878
Gammaproteobacteria
TTC
Glu
>WENV170680043
LFCJ01002899
456878
Gammaproteobacteria
TTC
Glu
>WENV170679811
LFCJ01000595
673628
Gammaproteobacteria
GTG
His
>WENV170679834
LFCJ01000728
113235
Gammaproteobacteria
GAG
Leu
>WENV170679925
LFCJ01001608
780241
Gammaproteobacteria
GCA
Cys
>WENV170679924
LFCJ01001608
655385
Gammaproteobacteria
GCC
Gly
>WENV170680042
LFCJ01002899
655385
Gammaproteobacteria
GCC
Gly
>WENV170679677
LFCJ01000124
271253
Gammaproteobacteria
CAT
Met
>WENV170679830
LFCJ01000690
113232
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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