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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170680817
LFEF01024391
273592
Bacteroidota
TGT
Thr
>WENV170680899
LFEF01032856
273592
Bacteroidota
TGT
Thr
>WENV170680864
LFEF01028623
274896
Bacteroidota
GTC
Asp
>WENV170680598
LFEF01002163
653934
Bacteroidota
TTC
Glu
>WENV170680850
LFEF01028262
87190
Bacteroidota
TGA
Ser
>WENV170680922
LFEF01034587
241622
Bacteroidota
TAC
Val
>WENV170680981
LFEF01039598
462022
Bacteroidota
GAA
Phe
>WENV170680839
LFEF01026880
279276
Bacteroidota
GAT
Ile
>WENV170680696
LFEF01011176
240996
Bacteroidota
TGG
Pro
>WENV170680715
LFEF01013515
290073
Bacteroidota
CAT
Met
>WENV170680841
LFEF01027062
466831
Bacteroidota
GCC
Gly
>WENV170680900
LFEF01032856
218109
Bacteroidota
GTA
Tyr
>WENV170680681
LFEF01009940
456222
Bacteroidota
CAT
Met
>WENV170680774
LFEF01020342
286546
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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