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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170701376
LKGT01008089
100431
Nitrososphaerota
GAG
Leu
>WENV170701536
LKGT01010468
100431
Nitrososphaerota
GAG
Leu
>WENV170701583
LKGT01011079
313451
Nitrososphaerota
GGC
Ala
>WENV170700996
LKGT01000598
313452
Nitrososphaerota
>WENV170701014
LKGT01001005
313452
Nitrososphaerota
>WENV170701232
LKGT01005288
313452
Nitrososphaerota
>WENV170701325
LKGT01006815
313452
Nitrososphaerota
>WENV170701445
LKGT01008978
313452
Nitrososphaerota
>WENV170701508
LKGT01009970
313452
Nitrososphaerota
>WENV170701586
LKGT01011160
313452
Nitrososphaerota
>WENV170701631
LKGT01011791
313452
Nitrososphaerota
>WENV170701664
LKGT01012500
313452
Nitrososphaerota
>WENV170701742
LKGT01013584
313452
Nitrososphaerota
>WENV170701216
LKGT01004929
313457
Nitrososphaerota
TCC
Gly
>WENV170701387
LKGT01008107
313457
Nitrososphaerota
TCC
Gly
>WENV170701515
LKGT01010035
129289
Nitrososphaerota
TGA
Ser
>WENV170701564
LKGT01010833
129289
Nitrososphaerota
TGA
Ser
>WENV170701737
LKGT01013499
129289
Nitrososphaerota
TGA
Ser
>WENV170701217
LKGT01004947
272884
Nitrososphaerota
CTC
Glu
>WENV170701481
LKGT01009529
272884
Nitrososphaerota
CTC
Glu
>WENV170701333
LKGT01006970
272887
Nitrososphaerota
TAC
Val
>WENV170701542
LKGT01010547
272887
Nitrososphaerota
TAC
Val
>WENV170701162
LKGT01004029
313450
Nitrososphaerota
GCC
Gly
>WENV170701206
LKGT01004844
100299
Nitrososphaerota
CAG
Leu
>WENV170701339
LKGT01007066
272886
Nitrososphaerota
GAT
Ile
>WENV170701448
LKGT01009021
272886
Nitrososphaerota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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