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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170700996
LKGT01000598
281128
Nitrososphaerota
CAT
Met
>WENV170701014
LKGT01001005
281128
Nitrososphaerota
CAT
Met
>WENV170701232
LKGT01005288
281128
Nitrososphaerota
CAT
Met
>WENV170701325
LKGT01006815
281128
Nitrososphaerota
CAT
Met
>WENV170701445
LKGT01008978
281128
Nitrososphaerota
CAT
Met
>WENV170701508
LKGT01009970
281128
Nitrososphaerota
CAT
Met
>WENV170701586
LKGT01011160
281128
Nitrososphaerota
CAT
Met
>WENV170701631
LKGT01011791
281128
Nitrososphaerota
CAT
Met
>WENV170701664
LKGT01012500
281128
Nitrososphaerota
CAT
Met
>WENV170701742
LKGT01013584
281128
Nitrososphaerota
CAT
Met
>WENV170701515
LKGT01010035
118562
Nitrososphaerota
TGA
Ser
>WENV170701564
LKGT01010833
118562
Nitrososphaerota
TGA
Ser
>WENV170701737
LKGT01013499
118562
Nitrososphaerota
TGA
Ser
>WENV170701216
LKGT01004929
271781
Nitrososphaerota
TCC
Gly
>WENV170701387
LKGT01008107
271781
Nitrososphaerota
TCC
Gly
>WENV170701162
LKGT01004029
281140
Nitrososphaerota
GCC
Gly
>WENV170701376
LKGT01008089
88082
Nitrososphaerota
GAG
Leu
>WENV170701536
LKGT01010468
88082
Nitrososphaerota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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