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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705022
LLEO01002006
275465
Gammaproteobacteria
GAC
Val
>WENV170705015
LLEO01001491
271464
Gammaproteobacteria
TGG
Pro
>WENV170705047
LLEO01007985
454805
Gammaproteobacteria
GCC
Gly
>WENV170705029
LLEO01003251
451916
Gammaproteobacteria
TTC
Glu
>WENV170705018
LLEO01001812
451780
Gammaproteobacteria
GCC
Gly
>WENV170705020
LLEO01001812
451780
Gammaproteobacteria
GCC
Gly
>WENV170705032
LLEO01004079
451780
Gammaproteobacteria
GCC
Gly
>WENV170705043
LLEO01007384
179971
Gammaproteobacteria
GTA
Tyr
>WENV170705041
LLEO01006783
180468
Gammaproteobacteria
TAG
Leu
>WENV170705026
LLEO01003178
653553
Gammaproteobacteria
TTG
Gln
>WENV170705033
LLEO01004573
460378
Gammaproteobacteria
TAC
Val
>WENV170705046
LLEO01007985
273697
Gammaproteobacteria
CAT
Met
>WENV170705049
LLEO01008819
451837
Gammaproteobacteria
TTC
Glu
>WENV170705016
LLEO01001491
302461
Gammaproteobacteria
TCT
Arg
>WENV170705025
LLEO01003178
180152
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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