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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180043709
LQAI01009657
753672
Thermodesulfobacteriota
GCC
Gly
>WENV180043505
LQAI01000132
544260
Thermodesulfobacteriota
>WENV180043580
LQAI01001159
753671
Thermodesulfobacteriota
GAC
Val
>WENV180043599
LQAI01001838
544254
Thermodesulfobacteriota
CTT
Lys
>WENV180043600
LQAI01001838
544254
Thermodesulfobacteriota
CTT
Lys
>WENV180043547
LQAI01000563
544257
Thermodesulfobacteriota
GGC
Ala
>WENV180043631
LQAI01003616
544257
Thermodesulfobacteriota
GGC
Ala
>WENV180043630
LQAI01003041
545492
Thermodesulfobacteriota
CTC
Glu
>WENV180043803
LQAI01020927
321500
Thermodesulfobacteriota
GAT
Ile
>WENV180043816
LQAI01022462
321500
Thermodesulfobacteriota
GAT
Ile
>WENV180043538
LQAI01000466
340526
Thermodesulfobacteriota
CCA
Trp
>WENV180043526
LQAI01000290
545497
Thermodesulfobacteriota
GGT
Thr
>WENV180043536
LQAI01000466
545501
Thermodesulfobacteriota
TCC
Gly
>WENV180043608
LQAI01002368
545504
Thermodesulfobacteriota
CCC
Gly
>WENV180043676
LQAI01006630
339332
Thermodesulfobacteriota
GTC
Asp
>WENV180043582
LQAI01001310
545493
Thermodesulfobacteriota
TGC
Ala
>WENV180043629
LQAI01003041
540395
Thermodesulfobacteriota
TTT
Lys
>WENV180043584
LQAI01001364
340527
Thermodesulfobacteriota
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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