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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170735704
LULL01008560
779604
Gammaproteobacteria
GCA
Cys
>WENV170735474
LULL01002419
275465
Gammaproteobacteria
GAC
Val
>WENV170735866
LULL01018187
270982
Gammaproteobacteria
GAT
Ile
>WENV170735272
LULL01000518
153705
Gammaproteobacteria
TAA
Leu
>WENV170735389
LULL01001296
271458
Gammaproteobacteria
GGG
Pro
>WENV170735961
LULL01026629
452416
Gammaproteobacteria
TTT
Lys
>WENV170735416
LULL01001587
271254
Gammaproteobacteria
CAT
Met
>WENV170735453
LULL01002091
464809
Gammaproteobacteria
GAA
Phe
>WENV170735703
LULL01008560
452412
Gammaproteobacteria
GCC
Gly
>WENV170735586
LULL01004745
273850
Gammaproteobacteria
GAT
Ile
>WENV170736021
LULL01032233
271460
Gammaproteobacteria
CGG
Pro
>WENV170735907
LULL01021461
452404
Gammaproteobacteria
TGT
Thr
>WENV170735427
LULL01001705
271459
Gammaproteobacteria
CCT
Arg
>WENV170735257
LULL01000395
179960
Gammaproteobacteria
TAG
Leu
>WENV170735488
LULL01002582
271200
Gammaproteobacteria
CAT
Met
>WENV170735592
LULL01004831
271456
Gammaproteobacteria
ACG
Arg
>WENV170735247
LULL01000349
451732
Gammaproteobacteria
GCC
Gly
>WENV170735381
LULL01001271
451732
Gammaproteobacteria
GCC
Gly
>WENV170735258
LULL01000395
779459
Gammaproteobacteria
CCA
Trp
>WENV170735266
LULL01000455
779459
Gammaproteobacteria
CCA
Trp
>WENV170735508
LULL01002860
452410
Gammaproteobacteria
TAC
Val
>WENV170735510
LULL01002860
452410
Gammaproteobacteria
TAC
Val
>WENV170735403
LULL01001458
452414
Gammaproteobacteria
TTC
Glu
>WENV170735609
LULL01005416
30354
Gammaproteobacteria
TGA
Ser
>WENV170735552
LULL01003969
466186
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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