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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170737394
LULO01000017
327001
Alphaproteobacteria
GTC
Asp
>WENV170737481
LULO01000243
739512
Alphaproteobacteria
GTT
Asn
>WENV170737526
LULO01000474
746455
Alphaproteobacteria
GGT
Thr
>WENV170738208
LULO01028624
871982
Alphaproteobacteria
TCC
Gly
>WENV170738025
LULO01012176
733646
Alphaproteobacteria
GAC
Val
>WENV170738297
LULO01043941
311588
Alphaproteobacteria
CAT
Met
>WENV170737412
LULO01000038
532533
Alphaproteobacteria
TGT
Thr
>WENV170737950
LULO01008645
53148
Alphaproteobacteria
GGA
Ser
>WENV170737380
LULO01000004
35742
Alphaproteobacteria
GGA
Ser
>WENV170737416
LULO01000056
871624
Alphaproteobacteria
GCA
Cys
>WENV170737389
LULO01000016
307408
Alphaproteobacteria
GGG
Pro
>WENV170737478
LULO01000225
871113
Alphaproteobacteria
GCA
Cys
>WENV170737403
LULO01000032
318508
Alphaproteobacteria
CCT
Arg
>WENV170738243
LULO01033706
733799
Alphaproteobacteria
GAC
Val
>WENV170737476
LULO01000221
735733
Alphaproteobacteria
TTG
Gln
>WENV170737561
LULO01000681
533047
Alphaproteobacteria
CCA
Trp
>WENV170737682
LULO01001576
53713
Alphaproteobacteria
TGA
Ser
>WENV170737573
LULO01000755
330169
Alphaproteobacteria
GTG
His
>WENV170737443
LULO01000123
53210
Alphaproteobacteria
GCT
Ser
>WENV170737470
LULO01000191
208815
Alphaproteobacteria
CAA
Leu
>WENV170737547
LULO01000637
306060
Alphaproteobacteria
ACG
Arg
>WENV170737471
LULO01000201
308243
Alphaproteobacteria
CAT
Met
>WENV170737879
LULO01006372
246980
Alphaproteobacteria
>WENV170737418
LULO01000059
204912
Alphaproteobacteria
TAG
Leu
>WENV170737610
LULO01000946
877024
Alphaproteobacteria
CTG
Gln
>WENV170737866
LULO01005800
305545
Alphaproteobacteria
GAT
Ile
>WENV170737439
LULO01000114
734005
Alphaproteobacteria
GGT
Thr
>WENV170737440
LULO01000114
871114
Alphaproteobacteria
TCC
Gly
>WENV170738229
LULO01030845
735797
Alphaproteobacteria
GAC
Val
>WENV170737385
LULO01000010
510765
Alphaproteobacteria
GGC
Ala
>WENV170737542
LULO01000578
510765
Alphaproteobacteria
GGC
Ala
>WENV170738260
LULO01036445
873449
Alphaproteobacteria
TCC
Gly
>WENV170737488
LULO01000266
533911
Alphaproteobacteria
GAA
Phe
>WENV170737501
LULO01000347
311532
Alphaproteobacteria
CAT
Met
>WENV170737530
LULO01000481
533045
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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