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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170747155
LUMB01020447
53582
Cyanobacteriota
TGA
Ser
>WENV170747089
LUMB01012461
311184
Cyanobacteriota
GTC
Asp
>WENV170747136
LUMB01017602
205243
Cyanobacteriota
CAA
Leu
>WENV170746910
LUMB01001965
735456
Cyanobacteriota
GTT
Asn
>WENV170746783
LUMB01000122
513810
Cyanobacteriota
>WENV170746966
LUMB01003654
310956
Cyanobacteriota
GGG
Pro
>WENV170746846
LUMB01000808
512049
Cyanobacteriota
TGC
Ala
>WENV170747103
LUMB01014237
513842
Cyanobacteriota
CGC
Ala
>WENV170746974
LUMB01003853
310953
Cyanobacteriota
ACG
Arg
>WENV170746862
LUMB01001147
513829
Cyanobacteriota
CCA
Trp
>WENV170747044
LUMB01008187
84157
Cyanobacteriota
TAA
Leu
>WENV170747119
LUMB01015912
308109
Cyanobacteriota
CCG
Arg
>WENV170746959
LUMB01003516
735452
Cyanobacteriota
GGT
Thr
>WENV170747106
LUMB01014474
735452
Cyanobacteriota
GGT
Thr
>WENV170746832
LUMB01000573
205244
Cyanobacteriota
TAG
Leu
>WENV170746873
LUMB01001276
510626
Cyanobacteriota
GTG
His
>WENV170746916
LUMB01002159
872522
Cyanobacteriota
TCC
Gly
>WENV170746942
LUMB01002992
311034
Cyanobacteriota
CAT
Met
>WENV170746806
LUMB01000350
311032
Cyanobacteriota
>WENV170746799
LUMB01000258
83817
Cyanobacteriota
TAA
Leu
>WENV170746787
LUMB01000149
735464
Cyanobacteriota
TTG
Gln
>WENV170747097
LUMB01013637
735464
Cyanobacteriota
TTG
Gln
>WENV170746838
LUMB01000686
53581
Cyanobacteriota
GGA
Ser
>WENV170746863
LUMB01001147
310954
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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