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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170756030
LUMO01003016
53582
Cyanobacteriota
TGA
Ser
>WENV170756075
LUMO01004303
311184
Cyanobacteriota
GTC
Asp
>WENV170756102
LUMO01005742
513776
Cyanobacteriota
GGC
Ala
>WENV170756394
LUMO01028755
513776
Cyanobacteriota
GGC
Ala
>WENV170756129
LUMO01007233
735456
Cyanobacteriota
GTT
Asn
>WENV170756147
LUMO01008131
513810
Cyanobacteriota
>WENV170756224
LUMO01012827
310956
Cyanobacteriota
GGG
Pro
>WENV170756413
LUMO01030955
23845
Cyanobacteriota
GCT
Ser
>WENV170755973
LUMO01001428
512049
Cyanobacteriota
TGC
Ala
>WENV170756015
LUMO01002427
310953
Cyanobacteriota
ACG
Arg
>WENV170755852
LUMO01000093
513829
Cyanobacteriota
CCA
Trp
>WENV170756282
LUMO01016796
308109
Cyanobacteriota
CCG
Arg
>WENV170755956
LUMO01000993
735452
Cyanobacteriota
GGT
Thr
>WENV170756268
LUMO01015863
735452
Cyanobacteriota
GGT
Thr
>WENV170756296
LUMO01017783
735452
Cyanobacteriota
GGT
Thr
>WENV170755958
LUMO01001023
205244
Cyanobacteriota
TAG
Leu
>WENV170756320
LUMO01020497
205244
Cyanobacteriota
TAG
Leu
>WENV170756029
LUMO01002964
510626
Cyanobacteriota
GTG
His
>WENV170756338
LUMO01022870
510626
Cyanobacteriota
GTG
His
>WENV170756131
LUMO01007310
311056
Cyanobacteriota
CGG
Pro
>WENV170756255
LUMO01015035
510628
Cyanobacteriota
CGT
Thr
>WENV170756074
LUMO01004303
513839
Cyanobacteriota
CCA
Trp
>WENV170756405
LUMO01030252
311068
Cyanobacteriota
CCT
Arg
>WENV170755982
LUMO01001662
872522
Cyanobacteriota
TCC
Gly
>WENV170755969
LUMO01001302
311034
Cyanobacteriota
CAT
Met
>WENV170755857
LUMO01000112
83817
Cyanobacteriota
TAA
Leu
>WENV170755943
LUMO01000784
735464
Cyanobacteriota
TTG
Gln
>WENV170756295
LUMO01017783
205245
Cyanobacteriota
GTA
Tyr
>WENV170756018
LUMO01002469
53581
Cyanobacteriota
GGA
Ser
>WENV170755853
LUMO01000093
310954
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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