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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170819748
MDSX01098577
456730
Bacteroidota
TTT
Lys
>WENV170817451
MDSX01050600
273835
Bacteroidota
GTT
Asn
>WENV170819259
MDSX01089112
273835
Bacteroidota
GTT
Asn
>WENV170814867
MDSX01000586
653934
Bacteroidota
TTC
Glu
>WENV170815476
MDSX01010888
653934
Bacteroidota
TTC
Glu
>WENV170817581
MDSX01053343
653934
Bacteroidota
TTC
Glu
>WENV170818499
MDSX01072968
653934
Bacteroidota
TTC
Glu
>WENV170819349
MDSX01091016
455860
Bacteroidota
TCC
Gly
>WENV170819393
MDSX01091593
456728
Bacteroidota
CAT
Met
>WENV170815525
MDSX01011936
271717
Bacteroidota
GTC
Asp
>WENV170817604
MDSX01053620
271717
Bacteroidota
GTC
Asp
>WENV170819750
MDSX01098633
271717
Bacteroidota
GTC
Asp
>WENV170818808
MDSX01079377
653874
Bacteroidota
TTC
Glu
>WENV170815423
MDSX01009906
456414
Bacteroidota
GAA
Phe
>WENV170816651
MDSX01034302
456414
Bacteroidota
GAA
Phe
>WENV170818639
MDSX01075942
456414
Bacteroidota
GAA
Phe
>WENV170819317
MDSX01090381
456414
Bacteroidota
GAA
Phe
>WENV170819820
MDSX01099759
456414
Bacteroidota
GAA
Phe
>WENV170815556
MDSX01012253
241614
Bacteroidota
GAC
Val
>WENV170817216
MDSX01045934
241614
Bacteroidota
GAC
Val
>WENV170817866
MDSX01058602
241614
Bacteroidota
GAC
Val
>WENV170818673
MDSX01076518
241614
Bacteroidota
GAC
Val
>WENV170818843
MDSX01080357
241614
Bacteroidota
GAC
Val
>WENV170815827
MDSX01017479
452741
Bacteroidota
TCC
Gly
>WENV170816622
MDSX01033736
452741
Bacteroidota
TCC
Gly
>WENV170817371
MDSX01049057
452741
Bacteroidota
TCC
Gly
>WENV170817546
MDSX01052667
452741
Bacteroidota
TCC
Gly
>WENV170818389
MDSX01070339
452741
Bacteroidota
TCC
Gly
>WENV170818402
MDSX01070522
452741
Bacteroidota
TCC
Gly
>WENV170819995
MDSX01103653
452741
Bacteroidota
TCC
Gly
>WENV170815388
MDSX01009066
452487
Bacteroidota
CCA
Trp
>WENV170815576
MDSX01012610
452487
Bacteroidota
CCA
Trp
>WENV170817053
MDSX01042909
452487
Bacteroidota
CCA
Trp
>WENV170815554
MDSX01012216
285374
Bacteroidota
GTC
Asp
>WENV170815639
MDSX01013956
285374
Bacteroidota
GTC
Asp
>WENV170816154
MDSX01024688
285374
Bacteroidota
GTC
Asp
>WENV170815453
MDSX01010481
457615
Bacteroidota
TTT
Lys
>WENV170816890
MDSX01039691
658037
Bacteroidota
GCC
Gly
>WENV170819038
MDSX01084290
241493
Bacteroidota
TAC
Val
>WENV170820094
MDSX01105731
280682
Bacteroidota
TGT
Thr
>WENV170817781
MDSX01057076
272122
Bacteroidota
GTC
Asp
>WENV170818594
MDSX01074854
272122
Bacteroidota
GTC
Asp
>WENV170818922
MDSX01082128
272122
Bacteroidota
GTC
Asp
>WENV170819155
MDSX01087033
272122
Bacteroidota
GTC
Asp
>WENV170819718
MDSX01097773
272122
Bacteroidota
GTC
Asp
>WENV170815581
MDSX01012724
655825
Bacteroidota
TTC
Glu
>WENV170816748
MDSX01036316
655825
Bacteroidota
TTC
Glu
>WENV170817310
MDSX01047937
655825
Bacteroidota
TTC
Glu
>WENV170817771
MDSX01056800
655825
Bacteroidota
TTC
Glu
>WENV170819523
MDSX01094292
655825
Bacteroidota
TTC
Glu
>WENV170814916
MDSX01001252
655825
Bacteroidota
TTC
Glu
>WENV170814944
MDSX01001796
655825
Bacteroidota
TTC
Glu
>WENV170815372
MDSX01008865
655825
Bacteroidota
TTC
Glu
>WENV170815716
MDSX01015806
31447
Bacteroidota
GGA
Ser
>WENV170815477
MDSX01010888
464575
Bacteroidota
GCC
Gly
>WENV170819845
MDSX01100451
452277
Bacteroidota
CAT
Met
>WENV170819294
MDSX01089972
180784
Bacteroidota
TAG
Leu
>WENV170815953
MDSX01020551
452740
Bacteroidota
GAA
Phe
>WENV170817582
MDSX01053366
452740
Bacteroidota
GAA
Phe
>WENV170819186
MDSX01087772
452740
Bacteroidota
GAA
Phe
>WENV170819786
MDSX01099308
452740
Bacteroidota
GAA
Phe
>WENV170819892
MDSX01101388
452740
Bacteroidota
GAA
Phe
>WENV170818273
MDSX01067508
460269
Bacteroidota
CAT
Met
>WENV170815869
MDSX01018459
453189
Bacteroidota
TTG
Gln
>WENV170819700
MDSX01097674
453189
Bacteroidota
TTG
Gln
>WENV170815406
MDSX01009536
278610
Bacteroidota
GTC
Asp
>WENV170819121
MDSX01086040
278725
Bacteroidota
GTT
Asn
>WENV170816891
MDSX01039691
112383
Bacteroidota
TAA
Leu
>WENV170818541
MDSX01073713
275630
Bacteroidota
GGC
Ala
>WENV170819859
MDSX01100680
277953
Bacteroidota
GTC
Asp
>WENV170819875
MDSX01101066
277953
Bacteroidota
GTC
Asp
>WENV170817518
MDSX01052068
180640
Bacteroidota
GTA
Tyr
>WENV170818898
MDSX01081727
180640
Bacteroidota
GTA
Tyr
>WENV170817258
MDSX01046784
86958
Bacteroidota
TGA
Ser
>WENV170817205
MDSX01045589
272325
Bacteroidota
TGC
Ala
>WENV170818257
MDSX01067157
272325
Bacteroidota
TGC
Ala
>WENV170816511
MDSX01031560
240659
Bacteroidota
TGG
Pro
>WENV170817152
MDSX01044498
240659
Bacteroidota
TGG
Pro
>WENV170818405
MDSX01070587
240659
Bacteroidota
TGG
Pro
>WENV170815340
MDSX01008388
271642
Bacteroidota
TCT
Arg
>WENV170815341
MDSX01008388
271642
Bacteroidota
TCT
Arg
>WENV170815986
MDSX01021356
271642
Bacteroidota
TCT
Arg
>WENV170817458
MDSX01050770
271642
Bacteroidota
TCT
Arg
>WENV170815491
MDSX01011279
655878
Bacteroidota
CCT
Arg
>WENV170819385
MDSX01091359
460717
Bacteroidota
TTT
Lys
>WENV170817325
MDSX01048412
240683
Bacteroidota
TGG
Pro
>WENV170817684
MDSX01055194
240683
Bacteroidota
TGG
Pro
>WENV170819910
MDSX01101895
240683
Bacteroidota
TGG
Pro
>WENV170819911
MDSX01101917
240683
Bacteroidota
TGG
Pro
>WENV170816907
MDSX01039941
275165
Bacteroidota
TGT
Thr
>WENV170815938
MDSX01020043
242570
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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