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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170820961
MDSY01014073
277951
Actinomycetota
CAT
Met
>WENV170822976
MDSY01049539
781405
Actinomycetota
GCA
Cys
>WENV170827604
MDSY01132623
278978
Actinomycetota
CAT
Met
>WENV170821640
MDSY01025308
459508
Actinomycetota
GTT
Asn
>WENV170824148
MDSY01070326
459508
Actinomycetota
GTT
Asn
>WENV170822068
MDSY01033469
273578
Actinomycetota
GAT
Ile
>WENV170824499
MDSY01077183
87759
Actinomycetota
GGA
Ser
>WENV170824639
MDSY01079404
458098
Actinomycetota
CGT
Thr
>WENV170824790
MDSY01082305
87121
Actinomycetota
TGA
Ser
>WENV170823475
MDSY01058319
657762
Actinomycetota
TTG
Gln
>WENV170823560
MDSY01059966
458095
Actinomycetota
CCG
Arg
>WENV170820911
MDSY01013637
458099
Actinomycetota
TTT
Lys
>WENV170824577
MDSY01078333
46740
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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