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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180049437
MPLU02059224
655310
Cyanobacteriota
GTT
Asn
>WENV180049678
MPLU02076930
655310
Cyanobacteriota
GTT
Asn
>WENV180050270
MPLU02123446
655310
Cyanobacteriota
GTT
Asn
>WENV180050301
MPLU02126140
655310
Cyanobacteriota
GTT
Asn
>WENV180053074
MPLU02344537
655310
Cyanobacteriota
GTT
Asn
>WENV180052050
MPLU02265055
455176
Cyanobacteriota
GTG
His
>WENV180052802
MPLU02326106
455176
Cyanobacteriota
GTG
His
>WENV180049358
MPLU02053779
19914
Cyanobacteriota
GCT
Ser
>WENV180051679
MPLU02237580
19914
Cyanobacteriota
GCT
Ser
>WENV180053187
MPLU02352988
19914
Cyanobacteriota
GCT
Ser
>WENV180049039
MPLU02029592
453784
Cyanobacteriota
GGC
Ala
>WENV180049810
MPLU02086466
453784
Cyanobacteriota
GGC
Ala
>WENV180050857
MPLU02176062
453784
Cyanobacteriota
GGC
Ala
>WENV180048763
MPLU02007315
274043
Cyanobacteriota
CCG
Arg
>WENV180050893
MPLU02178420
274043
Cyanobacteriota
CCG
Arg
>WENV180051703
MPLU02239004
274043
Cyanobacteriota
CCG
Arg
>WENV180052687
MPLU02317311
274043
Cyanobacteriota
CCG
Arg
>WENV180049036
MPLU02029476
661332
Cyanobacteriota
TTG
Gln
>WENV180050653
MPLU02158423
478836
Cyanobacteriota
CAT
Met
>WENV180049061
MPLU02031593
657291
Cyanobacteriota
GGT
Thr
>WENV180049326
MPLU02051657
465391
Cyanobacteriota
CCA
Trp
>WENV180049736
MPLU02082001
465391
Cyanobacteriota
CCA
Trp
>WENV180049106
MPLU02034609
654266
Cyanobacteriota
GAC
Val
>WENV180050133
MPLU02112789
654266
Cyanobacteriota
GAC
Val
>WENV180050718
MPLU02163735
654266
Cyanobacteriota
GAC
Val
>WENV180050738
MPLU02164644
654266
Cyanobacteriota
GAC
Val
>WENV180051761
MPLU02242469
654266
Cyanobacteriota
GAC
Val
>WENV180048875
MPLU02017748
654266
Cyanobacteriota
GAC
Val
>WENV180048713
MPLU02002968
454022
Cyanobacteriota
TGC
Ala
>WENV180049354
MPLU02053378
454022
Cyanobacteriota
TGC
Ala
>WENV180052063
MPLU02265601
455175
Cyanobacteriota
CCA
Trp
>WENV180050569
MPLU02151653
112585
Cyanobacteriota
CAG
Leu
>WENV180051683
MPLU02237731
112585
Cyanobacteriota
CAG
Leu
>WENV180052051
MPLU02265055
112585
Cyanobacteriota
CAG
Leu
>WENV180051609
MPLU02229688
284371
Cyanobacteriota
CGG
Pro
>WENV180049681
MPLU02077093
283475
Cyanobacteriota
ACG
Arg
>WENV180050367
MPLU02133036
283475
Cyanobacteriota
ACG
Arg
>WENV180052136
MPLU02271706
283475
Cyanobacteriota
ACG
Arg
>WENV180052406
MPLU02296223
283475
Cyanobacteriota
ACG
Arg
>WENV180052407
MPLU02296283
283475
Cyanobacteriota
ACG
Arg
>WENV180049004
MPLU02027384
283475
Cyanobacteriota
ACG
Arg
>WENV180050118
MPLU02111636
284301
Cyanobacteriota
CAT
Met
>WENV180049327
MPLU02051657
271967
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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