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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180064040
MPLX02390544
309637
Bacteroidota
GTT
Asn
>WENV180064380
MPLX02412743
309637
Bacteroidota
GTT
Asn
>WENV180064442
MPLX02416838
735236
Bacteroidota
GGT
Thr
>WENV180062275
MPLX02277384
734200
Bacteroidota
TTC
Glu
>WENV180057431
MPLX02004579
272547
Bacteroidota
TGG
Pro
>WENV180061198
MPLX02211475
272547
Bacteroidota
TGG
Pro
>WENV180063117
MPLX02332102
512002
Bacteroidota
CCA
Trp
>WENV180064171
MPLX02399057
512002
Bacteroidota
CCA
Trp
>WENV180064294
MPLX02407212
511077
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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