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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180057888
MPLX02026885
513840
Cyanobacteriota
GGC
Ala
>WENV180058397
MPLX02052657
513840
Cyanobacteriota
GGC
Ala
>WENV180059733
MPLX02129120
513840
Cyanobacteriota
GGC
Ala
>WENV180059912
MPLX02139185
513840
Cyanobacteriota
GGC
Ala
>WENV180061891
MPLX02251323
513840
Cyanobacteriota
GGC
Ala
>WENV180062616
MPLX02298911
513840
Cyanobacteriota
GGC
Ala
>WENV180063354
MPLX02349639
513840
Cyanobacteriota
GGC
Ala
>WENV180059908
MPLX02138952
311182
Cyanobacteriota
CGG
Pro
>WENV180062409
MPLX02284405
510622
Cyanobacteriota
CCA
Trp
>WENV180064191
MPLX02400252
510622
Cyanobacteriota
CCA
Trp
>WENV180058042
MPLX02033077
100796
Cyanobacteriota
CGA
Ser
>WENV180058521
MPLX02059718
311181
Cyanobacteriota
GGG
Pro
>WENV180058607
MPLX02063963
733930
Cyanobacteriota
GAC
Val
>WENV180059012
MPLX02085664
733930
Cyanobacteriota
GAC
Val
>WENV180063030
MPLX02325947
733930
Cyanobacteriota
GAC
Val
>WENV180063342
MPLX02348806
733930
Cyanobacteriota
GAC
Val
>WENV180062099
MPLX02265116
735606
Cyanobacteriota
TAC
Val
>WENV180062651
MPLX02300907
512049
Cyanobacteriota
TGC
Ala
>WENV180057565
MPLX02011812
310971
Cyanobacteriota
ACG
Arg
>WENV180060963
MPLX02198162
310971
Cyanobacteriota
ACG
Arg
>WENV180062154
MPLX02268128
310971
Cyanobacteriota
ACG
Arg
>WENV180057621
MPLX02014702
733924
Cyanobacteriota
GTT
Asn
>WENV180058932
MPLX02081626
733924
Cyanobacteriota
GTT
Asn
>WENV180059368
MPLX02108692
733924
Cyanobacteriota
GTT
Asn
>WENV180060919
MPLX02195859
733924
Cyanobacteriota
GTT
Asn
>WENV180062060
MPLX02262688
733924
Cyanobacteriota
GTT
Asn
>WENV180063916
MPLX02383062
733924
Cyanobacteriota
GTT
Asn
>WENV180057939
MPLX02029085
308109
Cyanobacteriota
CCG
Arg
>WENV180058237
MPLX02043475
308109
Cyanobacteriota
CCG
Arg
>WENV180062254
MPLX02274893
308109
Cyanobacteriota
CCG
Arg
>WENV180061640
MPLX02238084
308106
Cyanobacteriota
CAT
Met
>WENV180062186
MPLX02270431
308106
Cyanobacteriota
CAT
Met
>WENV180058241
MPLX02043562
128268
Cyanobacteriota
CAG
Leu
>WENV180058670
MPLX02067189
128268
Cyanobacteriota
CAG
Leu
>WENV180057949
MPLX02029292
510626
Cyanobacteriota
GTG
His
>WENV180058672
MPLX02067189
510626
Cyanobacteriota
GTG
His
>WENV180062440
MPLX02286765
510626
Cyanobacteriota
GTG
His
>WENV180060004
MPLX02145253
308103
Cyanobacteriota
TCT
Arg
>WENV180061708
MPLX02240843
513839
Cyanobacteriota
CCA
Trp
>WENV180057907
MPLX02027757
513850
Cyanobacteriota
CGC
Ala
>WENV180058745
MPLX02071680
513850
Cyanobacteriota
CGC
Ala
>WENV180061159
MPLX02209560
513850
Cyanobacteriota
CGC
Ala
>WENV180058388
MPLX02052452
311068
Cyanobacteriota
CCT
Arg
>WENV180059205
MPLX02097933
311068
Cyanobacteriota
CCT
Arg
>WENV180060005
MPLX02145295
311068
Cyanobacteriota
CCT
Arg
>WENV180061379
MPLX02221082
311068
Cyanobacteriota
CCT
Arg
>WENV180063622
MPLX02365154
205309
Cyanobacteriota
TAG
Leu
>WENV180058019
MPLX02032077
735525
Cyanobacteriota
TGT
Thr
>WENV180059642
MPLX02123827
735525
Cyanobacteriota
TGT
Thr
>WENV180064182
MPLX02399953
735604
Cyanobacteriota
TTG
Gln
>WENV180058659
MPLX02066772
23684
Cyanobacteriota
GCT
Ser
>WENV180060690
MPLX02184146
23684
Cyanobacteriota
GCT
Ser
>WENV180064176
MPLX02399339
23684
Cyanobacteriota
GCT
Ser
>WENV180059560
MPLX02118918
310954
Cyanobacteriota
GTC
Asp
>WENV180061709
MPLX02240843
310954
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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