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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180063754
MPLX02373798
313451
Nitrososphaerota
GGC
Ala
>WENV180058532
MPLX02060294
273713
Nitrososphaerota
GAT
Ile
>WENV180060361
MPLX02165058
736957
Nitrososphaerota
>WENV180057992
MPLX02030921
313452
Nitrososphaerota
>WENV180063755
MPLX02373798
313452
Nitrososphaerota
>WENV180060215
MPLX02157388
313457
Nitrososphaerota
TCC
Gly
>WENV180063519
MPLX02358451
313457
Nitrososphaerota
TCC
Gly
>WENV180063752
MPLX02373798
313457
Nitrososphaerota
TCC
Gly
>WENV180063753
MPLX02373798
129289
Nitrososphaerota
TGA
Ser
>WENV180060230
MPLX02158075
272884
Nitrososphaerota
CTC
Glu
>WENV180062975
MPLX02322249
273802
Nitrososphaerota
>WENV180059375
MPLX02109143
272887
Nitrososphaerota
TAC
Val
>WENV180059818
MPLX02134164
313450
Nitrososphaerota
GCC
Gly
>WENV180060231
MPLX02158075
313450
Nitrososphaerota
GCC
Gly
>WENV180063766
MPLX02374431
272886
Nitrososphaerota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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