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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180066177
MPLY02114127
271464
Gammaproteobacteria
TGG
Pro
>WENV180065854
MPLY02092258
270982
Gammaproteobacteria
GAT
Ile
>WENV180066258
MPLY02118806
270982
Gammaproteobacteria
GAT
Ile
>WENV180065867
MPLY02092860
272023
Gammaproteobacteria
GAT
Ile
>WENV180065963
MPLY02099342
272023
Gammaproteobacteria
GAT
Ile
>WENV180067424
MPLY02200539
780592
Gammaproteobacteria
CCC
Gly
>WENV180064950
MPLY02032422
275934
Gammaproteobacteria
GGG
Pro
>WENV180065857
MPLY02092299
780764
Gammaproteobacteria
TCC
Gly
>WENV180066359
MPLY02125715
466510
Gammaproteobacteria
GCC
Gly
>WENV180065399
MPLY02061192
466186
Gammaproteobacteria
TGC
Ala
>WENV180065776
MPLY02086559
466186
Gammaproteobacteria
TGC
Ala
>WENV180065964
MPLY02099342
466186
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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