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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170996935
MWWG01007401
274896
Bacteroidota
GTC
Asp
>WENV170997060
MWWG01025501
274896
Bacteroidota
GTC
Asp
>WENV170997092
MWWG01029954
274896
Bacteroidota
GTC
Asp
>WENV170997221
MWWG01054370
274896
Bacteroidota
GTC
Asp
>WENV170997280
MWWG01073892
274896
Bacteroidota
GTC
Asp
>WENV170997320
MWWG01085015
274896
Bacteroidota
GTC
Asp
>WENV170997441
MWWG01133989
274896
Bacteroidota
GTC
Asp
>WENV170997578
MWWG01194104
274896
Bacteroidota
GTC
Asp
>WENV170997587
MWWG01200007
274896
Bacteroidota
GTC
Asp
>WENV170997607
MWWG01208502
274896
Bacteroidota
GTC
Asp
>WENV170997648
MWWG01220484
274896
Bacteroidota
GTC
Asp
>WENV170997161
MWWG01041022
241359
Bacteroidota
TAC
Val
>WENV170997438
MWWG01133097
456863
Bacteroidota
GCC
Gly
>WENV170997439
MWWG01133097
456863
Bacteroidota
GCC
Gly
>WENV170997674
MWWG01236324
456865
Bacteroidota
TTG
Gln
>WENV170996875
MWWG01001228
457188
Bacteroidota
GCC
Gly
>WENV170996888
MWWG01002938
457188
Bacteroidota
GCC
Gly
>WENV170997389
MWWG01110101
457188
Bacteroidota
GCC
Gly
>WENV170997468
MWWG01147869
454409
Bacteroidota
GCC
Gly
>WENV170997270
MWWG01071278
275629
Bacteroidota
GTT
Asn
>WENV170997095
MWWG01030282
462022
Bacteroidota
GAA
Phe
>WENV170997451
MWWG01139993
457377
Bacteroidota
CAT
Met
>WENV170997045
MWWG01022093
273341
Bacteroidota
TGC
Ala
>WENV170997199
MWWG01047582
273341
Bacteroidota
TGC
Ala
>WENV170997428
MWWG01125349
273341
Bacteroidota
TGC
Ala
>WENV170996896
MWWG01003348
240638
Bacteroidota
TAC
Val
>WENV170997054
MWWG01024006
228589
Bacteroidota
CAA
Leu
>WENV170997188
MWWG01044227
456154
Bacteroidota
TTT
Lys
>WENV170997350
MWWG01094286
275630
Bacteroidota
GGC
Ala
>WENV170997194
MWWG01045178
180844
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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