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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170997310
MWWG01080981
99871
Bacteroidota
TGA
Ser
>WENV170997632
MWWG01216941
99871
Bacteroidota
TGA
Ser
>WENV170997451
MWWG01139993
509046
Bacteroidota
>WENV170996896
MWWG01003348
274838
Bacteroidota
TAC
Val
>WENV170997165
MWWG01041144
272669
Bacteroidota
TGG
Pro
>WENV170997188
MWWG01044227
511491
Bacteroidota
TTT
Lys
>WENV170997298
MWWG01078042
732407
Bacteroidota
GGT
Thr
>WENV170997608
MWWG01208965
732407
Bacteroidota
GGT
Thr
>WENV170997044
MWWG01022093
272539
Bacteroidota
GAT
Ile
>WENV170997178
MWWG01042820
272539
Bacteroidota
GAT
Ile
>WENV170997615
MWWG01212303
272539
Bacteroidota
GAT
Ile
>WENV170997427
MWWG01125349
340480
Bacteroidota
GAT
Ile
>WENV170997388
MWWG01109888
750300
Bacteroidota
GGT
Thr
>WENV170997538
MWWG01178787
356847
Bacteroidota
TGT
Thr
>WENV170997274
MWWG01072195
871074
Bacteroidota
CCA
Trp
>WENV170997358
MWWG01099290
871074
Bacteroidota
CCA
Trp
>WENV170997492
MWWG01154563
871074
Bacteroidota
CCA
Trp
>WENV170997533
MWWG01177821
871074
Bacteroidota
CCA
Trp
>WENV170997645
MWWG01220238
871074
Bacteroidota
CCA
Trp
>WENV170996918
MWWG01005557
308950
Bacteroidota
GTT
Asn
>WENV170996870
MWWG01000947
23914
Bacteroidota
GCT
Ser
>WENV170996891
MWWG01002994
23914
Bacteroidota
GCT
Ser
>WENV170997620
MWWG01212818
23914
Bacteroidota
GCT
Ser
>WENV170997194
MWWG01045178
204616
Bacteroidota
TAG
Leu
>WENV170997009
MWWG01018283
545302
Bacteroidota
TTT
Lys
>WENV170997010
MWWG01018283
545302
Bacteroidota
TTT
Lys
>WENV170997021
MWWG01019172
305381
Bacteroidota
GTT
Asn
>WENV170997219
MWWG01053983
305381
Bacteroidota
GTT
Asn
>WENV170997299
MWWG01078173
305381
Bacteroidota
GTT
Asn
>WENV170996904
MWWG01003897
745054
Bacteroidota
CCT
Arg
>WENV170997516
MWWG01168412
176917
Bacteroidota
GTA
Tyr
>WENV170997095
MWWG01030282
514840
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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