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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171002233
NFZJ01004594
511171
Bacteroidota
CCA
Trp
>WENV171002313
NFZJ01011390
509554
Bacteroidota
CCA
Trp
>WENV171002222
NFZJ01002854
871470
Bacteroidota
TTG
Gln
>WENV171002205
NFZJ01001807
128387
Bacteroidota
CAG
Leu
>WENV171002308
NFZJ01010645
83589
Bacteroidota
TAA
Leu
>WENV171002187
NFZJ01000004
204373
Bacteroidota
TAG
Leu
>WENV171002311
NFZJ01010709
733197
Bacteroidota
GGT
Thr
>WENV171002297
NFZJ01008871
734256
Bacteroidota
TTC
Glu
>WENV171002298
NFZJ01008871
734256
Bacteroidota
TTC
Glu
>WENV171002229
NFZJ01003418
204378
Bacteroidota
CAA
Leu
>WENV171002225
NFZJ01003183
515078
Bacteroidota
CCA
Trp
>WENV171002326
NFZJ01013633
306902
Bacteroidota
>WENV171002206
NFZJ01001807
128388
Bacteroidota
GAG
Leu
>WENV171002237
NFZJ01005202
515071
Bacteroidota
TTT
Lys
>WENV171002294
NFZJ01008428
312289
Bacteroidota
TCT
Arg
>WENV171002288
NFZJ01007669
509545
Bacteroidota
CGT
Thr
>WENV171002305
NFZJ01009669
871948
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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