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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171003609
NNBU01000730
46271
Alphaproteobacteria
GGA
Ser
>WENV171003550
NNBU01000367
454566
Alphaproteobacteria
GAA
Phe
>WENV171003570
NNBU01000548
456497
Alphaproteobacteria
TGT
Thr
>WENV171003605
NNBU01000710
179995
Alphaproteobacteria
TAG
Leu
>WENV171003514
NNBU01000231
273452
Alphaproteobacteria
CAT
Met
>WENV171003535
NNBU01000306
30705
Alphaproteobacteria
GCT
Ser
>WENV171003599
NNBU01000691
270892
Alphaproteobacteria
CGG
Pro
>WENV171003516
NNBU01000234
454510
Alphaproteobacteria
CGT
Thr
>WENV171003565
NNBU01000498
780884
Alphaproteobacteria
CTG
Gln
>WENV171003511
NNBU01000230
287573
Alphaproteobacteria
TGG
Pro
>WENV171003604
NNBU01000702
451867
Alphaproteobacteria
CTT
Lys
>WENV171003557
NNBU01000405
112749
Alphaproteobacteria
CAG
Leu
>WENV171003526
NNBU01000252
451742
Alphaproteobacteria
GGC
Ala
>WENV171003513
NNBU01000231
273451
Alphaproteobacteria
GTG
His
>WENV171003530
NNBU01000283
273450
Alphaproteobacteria
TCT
Arg
>WENV171003598
NNBU01000691
653591
Alphaproteobacteria
TTG
Gln
>WENV171003551
NNBU01000375
454362
Alphaproteobacteria
CGT
Thr
>WENV171003553
NNBU01000385
270896
Alphaproteobacteria
CCG
Arg
>WENV171003496
NNBU01000208
454512
Alphaproteobacteria
CCA
Trp
>WENV171003583
NNBU01000586
273603
Alphaproteobacteria
TGG
Pro
>WENV171003521
NNBU01000238
454166
Alphaproteobacteria
CGC
Ala
>WENV171003563
NNBU01000475
654998
Alphaproteobacteria
GCC
Gly
>WENV171003501
NNBU01000218
294262
Alphaproteobacteria
CCT
Arg
>WENV171003510
NNBU01000230
454504
Alphaproteobacteria
CAT
Met
>WENV171003571
NNBU01000548
179994
Alphaproteobacteria
GTA
Tyr
>WENV171003580
NNBU01000586
653586
Alphaproteobacteria
TTC
Glu
>WENV171003581
NNBU01000586
653586
Alphaproteobacteria
TTC
Glu
>WENV171003582
NNBU01000586
653586
Alphaproteobacteria
TTC
Glu
>WENV171003508
NNBU01000230
654791
Alphaproteobacteria
CTC
Glu
>WENV171003524
NNBU01000239
112839
Alphaproteobacteria
CAG
Leu
>WENV171003515
NNBU01000234
780039
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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