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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180116872
OARB01000012
451622
Gammaproteobacteria
GGT
Thr
>WENV180116827
OARB01000001
271705
Gammaproteobacteria
TGG
Pro
>WENV180116865
OARB01000008
271705
Gammaproteobacteria
TGG
Pro
>WENV180116867
OARB01000008
271705
Gammaproteobacteria
TGG
Pro
>WENV180116850
OARB01000002
112362
Gammaproteobacteria
TAA
Leu
>WENV180116853
OARB01000004
112362
Gammaproteobacteria
TAA
Leu
>WENV180116898
OARB01000024
271393
Gammaproteobacteria
CAT
Met
>WENV180116964
OARB01000638
451838
Gammaproteobacteria
TAC
Val
>WENV180116847
OARB01000002
452730
Gammaproteobacteria
GTT
Asn
>WENV180116891
OARB01000023
12288
Gammaproteobacteria
GCT
Ser
>WENV180116869
OARB01000009
271388
Gammaproteobacteria
ACG
Arg
>WENV180116863
OARB01000008
271704
Gammaproteobacteria
CCG
Arg
>WENV180116849
OARB01000002
451780
Gammaproteobacteria
GCC
Gly
>WENV180116851
OARB01000002
451780
Gammaproteobacteria
GCC
Gly
>WENV180116893
OARB01000024
451780
Gammaproteobacteria
GCC
Gly
>WENV180116894
OARB01000024
451780
Gammaproteobacteria
GCC
Gly
>WENV180116895
OARB01000024
451780
Gammaproteobacteria
GCC
Gly
>WENV180116897
OARB01000024
451780
Gammaproteobacteria
GCC
Gly
>WENV180116984
OARB01026967
451841
Gammaproteobacteria
GGC
Ala
>WENV180116873
OARB01000013
451784
Gammaproteobacteria
GAA
Phe
>WENV180116877
OARB01000013
451784
Gammaproteobacteria
GAA
Phe
>WENV180116861
OARB01000007
86896
Gammaproteobacteria
GGA
Ser
>WENV180116875
OARB01000013
451785
Gammaproteobacteria
GAA
Phe
>WENV180116889
OARB01000023
12287
Gammaproteobacteria
GCT
Ser
>WENV180116848
OARB01000002
779665
Gammaproteobacteria
GCA
Cys
>WENV180116870
OARB01000009
218021
Gammaproteobacteria
GAG
Leu
>WENV180116830
OARB01000001
30381
Gammaproteobacteria
TGA
Ser
>WENV180116862
OARB01000008
30381
Gammaproteobacteria
TGA
Ser
>WENV180116937
OARB01000136
179985
Gammaproteobacteria
>WENV180116985
OARB01028520
179985
Gammaproteobacteria
>WENV180116829
OARB01000001
270870
Gammaproteobacteria
GGG
Pro
>WENV180116983
OARB01010560
271391
Gammaproteobacteria
GAT
Ile
>WENV180116965
OARB01000638
454931
Gammaproteobacteria
TGC
Ala
>WENV180116828
OARB01000001
271707
Gammaproteobacteria
TCT
Arg
>WENV180116836
OARB01000001
154019
Gammaproteobacteria
CAG
Leu
>WENV180116842
OARB01000001
154019
Gammaproteobacteria
CAG
Leu
>WENV180116852
OARB01000004
779598
Gammaproteobacteria
GCA
Cys
>WENV180116854
OARB01000004
779598
Gammaproteobacteria
GCA
Cys
>WENV180116833
OARB01000001
180129
Gammaproteobacteria
TAG
Leu
>WENV180116838
OARB01000001
180129
Gammaproteobacteria
TAG
Leu
>WENV180116840
OARB01000001
180129
Gammaproteobacteria
TAG
Leu
>WENV180116844
OARB01000001
180129
Gammaproteobacteria
TAG
Leu
>WENV180116846
OARB01000001
180129
Gammaproteobacteria
TAG
Leu
>WENV180116963
OARB01000638
655179
Gammaproteobacteria
TTT
Lys
>WENV180116939
OARB01000136
452731
Gammaproteobacteria
GGT
Thr
>WENV180116832
OARB01000001
153787
Gammaproteobacteria
CAG
Leu
>WENV180116885
OARB01000016
270822
Gammaproteobacteria
CCA
Trp
>WENV180116839
OARB01000001
654002
Gammaproteobacteria
TTG
Gln
>WENV180116868
OARB01000009
271392
Gammaproteobacteria
ACG
Arg
>WENV180116890
OARB01000023
271392
Gammaproteobacteria
ACG
Arg
>WENV180116962
OARB01000638
451837
Gammaproteobacteria
TTC
Glu
>WENV180116892
OARB01000023
452727
Gammaproteobacteria
CAT
Met
>WENV180116857
OARB01000005
180128
Gammaproteobacteria
CAA
Leu
>WENV180116860
OARB01000006
271706
Gammaproteobacteria
GAC
Val
>WENV180116834
OARB01000001
654004
Gammaproteobacteria
TTG
Gln
>WENV180116837
OARB01000001
654004
Gammaproteobacteria
TTG
Gln
>WENV180116843
OARB01000001
654004
Gammaproteobacteria
TTG
Gln
>WENV180116845
OARB01000001
654004
Gammaproteobacteria
TTG
Gln
>WENV180116879
OARB01000013
452729
Gammaproteobacteria
GTT
Asn
>WENV180116881
OARB01000013
452729
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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