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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180117318
OARK01000088
72933
Bacillota
AAG
Leu
>WENV180117347
OARK01000326
456696
Bacillota
GTG
His
>WENV180117560
OARK01016498
653346
Bacillota
TTC
Glu
>WENV180117317
OARK01000085
655955
Bacillota
CCT
Arg
>WENV180117397
OARK01001355
451587
Bacillota
TGC
Ala
>WENV180117541
OARK01010785
270488
Bacillota
GTC
Asp
>WENV180117532
OARK01010162
271477
Bacillota
GTC
Asp
>WENV180117585
OARK01023053
271031
Bacillota
CAT
Met
>WENV180117609
OARK01030067
779427
Bacillota
GCA
Cys
>WENV180117530
OARK01010162
654050
Bacillota
TTC
Glu
>WENV180117625
OARK01037041
451355
Bacillota
GAC
Val
>WENV180117453
OARK01003899
457131
Bacillota
TTT
Lys
>WENV180117533
OARK01010376
470638
Bacillota
GTT
Asn
>WENV180117517
OARK01008105
779608
Bacillota
TCC
Gly
>WENV180117514
OARK01008105
466758
Bacillota
TTT
Lys
>WENV180117498
OARK01006576
452288
Bacillota
CAT
Met
>WENV180117580
OARK01021505
112239
Bacillota
CAG
Leu
>WENV180117621
OARK01035808
270622
Bacillota
TGG
Pro
>WENV180117457
OARK01003899
73263
Bacillota
TAA
Leu
>WENV180117630
OARK01037780
86865
Bacillota
AAG
Leu
>WENV180117594
OARK01026354
452444
Bacillota
GTG
His
>WENV180117319
OARK01000088
463274
Bacillota
CGT
Thr
>WENV180117486
OARK01005723
653859
Bacillota
GCA
Cys
>WENV180117540
OARK01010616
451582
Bacillota
GTT
Asn
>WENV180117283
OARK01000003
456694
Bacillota
CTT
Lys
>WENV180117519
OARK01008105
452437
Bacillota
TGG
Pro
>WENV180117624
OARK01036282
466782
Bacillota
CCC
Gly
>WENV180117538
OARK01010616
451581
Bacillota
TAC
Val
>WENV180117458
OARK01003899
274747
Bacillota
ACG
Arg
>WENV180117622
OARK01035808
270626
Bacillota
GTG
His
>WENV180117635
OARK01038855
779385
Bacillota
CTG
Gln
>WENV180117494
OARK01006517
451357
Bacillota
CTT
Lys
>WENV180117490
OARK01006091
452813
Bacillota
GAA
Phe
>WENV180117567
OARK01017724
275982
Bacillota
GTC
Asp
>WENV180117559
OARK01016498
270546
Bacillota
CAT
Met
>WENV180117518
OARK01008105
289179
Bacillota
TCT
Arg
>WENV180117633
OARK01038386
20504
Bacillota
GGA
Ser
>WENV180117603
OARK01027604
656246
Bacillota
TTC
Glu
>WENV180117596
OARK01026514
653369
Bacillota
CTC
Glu
>WENV180117409
OARK01001813
270399
Bacillota
GAT
Ile
>WENV180117537
OARK01010616
779426
Bacillota
TCC
Gly
>WENV180117408
OARK01001813
451344
Bacillota
TGC
Ala
>WENV180117480
OARK01005067
454988
Bacillota
TGC
Ala
>WENV180117578
OARK01020820
451372
Bacillota
GAA
Phe
>WENV180117646
OARK01044757
275441
Bacillota
GAT
Ile
>WENV180117638
OARK01041486
72675
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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