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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180123329
OASW01000203
306396
Actinomycetota
GGG
Pro
>WENV180123350
OASW01000305
508588
Actinomycetota
CCT
Arg
>WENV180123356
OASW01000327
306398
Actinomycetota
CAA
Leu
>WENV180123274
OASW01000061
305610
Actinomycetota
CAT
Met
>WENV180123252
OASW01000048
263190
Actinomycetota
TAA
Leu
>WENV180123245
OASW01000043
871334
Actinomycetota
TTG
Gln
>WENV180123248
OASW01000043
306400
Actinomycetota
TGG
Pro
>WENV180123276
OASW01000062
35732
Actinomycetota
GAG
Leu
>WENV180123326
OASW01000196
306397
Actinomycetota
TCT
Arg
>WENV180123327
OASW01000198
508587
Actinomycetota
GTG
His
>WENV180123365
OASW01000382
871333
Actinomycetota
CCC
Gly
>WENV180123246
OASW01000043
510644
Actinomycetota
GGC
Ala
>WENV180123247
OASW01000043
510644
Actinomycetota
GGC
Ala
>WENV180123303
OASW01000116
305613
Actinomycetota
GAT
Ile
>WENV180123250
OASW01000045
305625
Actinomycetota
CTT
Lys
>WENV180123255
OASW01000050
508585
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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