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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180123432
OASW01002072
515153
Bacillota
TTG
Gln
>WENV180123418
OASW01001573
511199
Bacillota
TTT
Lys
>WENV180123440
OASW01002311
511199
Bacillota
TTT
Lys
>WENV180123472
OASW01003329
15082
Bacillota
TGA
Ser
>WENV180123474
OASW01003329
515144
Bacillota
GAA
Phe
>WENV180123405
OASW01001214
508433
Bacillota
GAA
Phe
>WENV180123436
OASW01002311
871504
Bacillota
TCC
Gly
>WENV180123433
OASW01002072
515628
Bacillota
TTT
Lys
>WENV180123431
OASW01002072
258951
Bacillota
GTA
Tyr
>WENV180123485
OASW01005173
323279
Bacillota
CAT
Met
>WENV180123402
OASW01001112
732825
Bacillota
GCC
Gly
>WENV180123454
OASW01002623
306239
Bacillota
GTG
His
>WENV180123389
OASW01000905
515573
Bacillota
GGT
Thr
>WENV180123428
OASW01002072
515145
Bacillota
TTC
Glu
>WENV180123498
OASW01008858
509305
Bacillota
TGC
Ala
>WENV180123466
OASW01003320
871503
Bacillota
CCA
Trp
>WENV180123471
OASW01003329
312328
Bacillota
>WENV180123469
OASW01003329
515143
Bacillota
TGC
Ala
>WENV180123439
OASW01002311
742858
Bacillota
TTG
Gln
>WENV180123420
OASW01001653
526384
Bacillota
CCG
Arg
>WENV180123441
OASW01002311
246975
Bacillota
TAG
Leu
>WENV180123437
OASW01002311
323280
Bacillota
TCT
Arg
>WENV180123488
OASW01006604
247303
Bacillota
TAG
Leu
>WENV180123461
OASW01002819
306237
Bacillota
GTC
Asp
>WENV180123421
OASW01001659
207845
Bacillota
GTA
Tyr
>WENV180123415
OASW01001521
871296
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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