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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180123183
OASW01000002
308706
Bacteroidota
GGC
Ala
>WENV180123197
OASW01000011
99769
Bacteroidota
TGA
Ser
>WENV180123199
OASW01000012
99769
Bacteroidota
TGA
Ser
>WENV180123242
OASW01000041
99769
Bacteroidota
TGA
Ser
>WENV180123296
OASW01000096
510261
Bacteroidota
>WENV180123354
OASW01000323
272450
Bacteroidota
TGG
Pro
>WENV180123311
OASW01000131
308675
Bacteroidota
GGC
Ala
>WENV180123177
OASW01000001
871962
Bacteroidota
CTG
Gln
>WENV180123256
OASW01000052
515069
Bacteroidota
CCC
Gly
>WENV180123184
OASW01000003
872105
Bacteroidota
TTG
Gln
>WENV180123341
OASW01000236
872105
Bacteroidota
TTG
Gln
>WENV180123237
OASW01000034
272734
Bacteroidota
TAC
Val
>WENV180123238
OASW01000034
272734
Bacteroidota
TAC
Val
>WENV180123206
OASW01000014
734283
Bacteroidota
CTC
Glu
>WENV180123235
OASW01000031
734283
Bacteroidota
CTC
Glu
>WENV180123226
OASW01000024
311873
Bacteroidota
GTC
Asp
>WENV180123214
OASW01000019
128518
Bacteroidota
GAG
Leu
>WENV180123279
OASW01000074
511224
Bacteroidota
CCC
Gly
>WENV180123178
OASW01000001
272301
Bacteroidota
GGG
Pro
>WENV180123264
OASW01000058
308705
Bacteroidota
>WENV180123230
OASW01000025
734621
Bacteroidota
CCT
Arg
>WENV180123204
OASW01000014
515071
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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