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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1027116
SRR035086.65700
654266
Cyanobacteriota
GAC
Val
>SRA1027062
SRR035086.54586
462651
Cyanobacteriota
TGC
Ala
>SRA1027789
SRR035086.192160
462651
Cyanobacteriota
TGC
Ala
>SRA1028367
SRR035086.309989
462651
Cyanobacteriota
TGC
Ala
>SRA1027023
SRR035086.46014
112585
Cyanobacteriota
CAG
Leu
>SRA1027390
SRR035086.116406
112585
Cyanobacteriota
CAG
Leu
>SRA1028003
SRR035086.234951
112585
Cyanobacteriota
CAG
Leu
>SRA1027046
SRR035086.51201
19914
Cyanobacteriota
GCT
Ser
>SRA1027592
SRR035086.154328
284371
Cyanobacteriota
CGG
Pro
>SRA1027744
SRR035086.184974
465391
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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