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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1051564
SRR035098.30279
654266
Cyanobacteriota
GAC
Val
>SRA1051944
SRR035098.111204
654266
Cyanobacteriota
GAC
Val
>SRA1051975
SRR035098.116124
654266
Cyanobacteriota
GAC
Val
>SRA1052324
SRR035098.182685
654266
Cyanobacteriota
GAC
Val
>SRA1052379
SRR035098.192435
654266
Cyanobacteriota
GAC
Val
>SRA1052657
SRR035098.247001
654266
Cyanobacteriota
GAC
Val
>SRA1052877
SRR035098.290187
654266
Cyanobacteriota
GAC
Val
>SRA1053669
SRR035098.463022
654266
Cyanobacteriota
GAC
Val
>SRA1051600
SRR035098.36880
112585
Cyanobacteriota
CAG
Leu
>SRA1051909
SRR035098.100867
112585
Cyanobacteriota
CAG
Leu
>SRA1051943
SRR035098.111084
112585
Cyanobacteriota
CAG
Leu
>SRA1052283
SRR035098.174969
112585
Cyanobacteriota
CAG
Leu
>SRA1052350
SRR035098.185681
112585
Cyanobacteriota
CAG
Leu
>SRA1052428
SRR035098.200788
112585
Cyanobacteriota
CAG
Leu
>SRA1052685
SRR035098.253178
112585
Cyanobacteriota
CAG
Leu
>SRA1052906
SRR035098.298009
112585
Cyanobacteriota
CAG
Leu
>SRA1052964
SRR035098.309013
112585
Cyanobacteriota
CAG
Leu
>SRA1053302
SRR035098.377953
112585
Cyanobacteriota
CAG
Leu
>SRA1053402
SRR035098.398880
112585
Cyanobacteriota
CAG
Leu
>SRA1053405
SRR035098.399683
112585
Cyanobacteriota
CAG
Leu
>SRA1051996
SRR035098.121098
19914
Cyanobacteriota
GCT
Ser
>SRA1053417
SRR035098.401809
19914
Cyanobacteriota
GCT
Ser
>SRA1051577
SRR035098.33331
284371
Cyanobacteriota
CGG
Pro
>SRA1052217
SRR035098.161755
284371
Cyanobacteriota
CGG
Pro
>SRA1052380
SRR035098.192501
284371
Cyanobacteriota
CGG
Pro
>SRA1052519
SRR035098.219599
284371
Cyanobacteriota
CGG
Pro
>SRA1052793
SRR035098.277110
284371
Cyanobacteriota
CGG
Pro
>SRA1052937
SRR035098.303528
284371
Cyanobacteriota
CGG
Pro
>SRA1053467
SRR035098.411852
284371
Cyanobacteriota
CGG
Pro
>SRA1053788
SRR035098.495796
284371
Cyanobacteriota
CGG
Pro
>SRA1053391
SRR035098.397348
465391
Cyanobacteriota
CCA
Trp
>SRA1051659
SRR035098.51670
465391
Cyanobacteriota
CCA
Trp
>SRA1051995
SRR035098.120932
465391
Cyanobacteriota
CCA
Trp
>SRA1052084
SRR035098.137448
465391
Cyanobacteriota
CCA
Trp
>SRA1052403
SRR035098.196494
465391
Cyanobacteriota
CCA
Trp
>SRA1052569
SRR035098.231435
465391
Cyanobacteriota
CCA
Trp
>SRA1052595
SRR035098.234833
465391
Cyanobacteriota
CCA
Trp
>SRA1052764
SRR035098.269362
465391
Cyanobacteriota
CCA
Trp
>SRA1052899
SRR035098.296188
465391
Cyanobacteriota
CCA
Trp
>SRA1052916
SRR035098.299615
465391
Cyanobacteriota
CCA
Trp
>SRA1052995
SRR035098.315470
465391
Cyanobacteriota
CCA
Trp
>SRA1053580
SRR035098.443356
465391
Cyanobacteriota
CCA
Trp
>SRA1052203
SRR035098.159788
453784
Cyanobacteriota
GGC
Ala
>SRA1052332
SRR035098.183429
453784
Cyanobacteriota
GGC
Ala
>SRA1052896
SRR035098.295889
453784
Cyanobacteriota
GGC
Ala
>SRA1052945
SRR035098.305341
453784
Cyanobacteriota
GGC
Ala
>SRA1053196
SRR035098.359549
453784
Cyanobacteriota
GGC
Ala
>SRA1053225
SRR035098.364245
453784
Cyanobacteriota
GGC
Ala
>SRA1053226
SRR035098.364550
453784
Cyanobacteriota
GGC
Ala
>SRA1053358
SRR035098.390750
453784
Cyanobacteriota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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