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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV078620
AAQK01004218
283376
Actinomycetota
GGT
Thr
>WENV078574
AAQK01002063
50172
Actinomycetota
TGA
Ser
>WENV078677
AAQK01006252
19409
Actinomycetota
GAG
Leu
>WENV078556
AAQK01001268
69295
Actinomycetota
CAG
Leu
>WENV078626
AAQK01004313
69295
Actinomycetota
CAG
Leu
>WENV078738
AAQK01009578
69295
Actinomycetota
CAG
Leu
>WENV078634
AAQK01004449
214813
Actinomycetota
ACG
Arg
>WENV078775
AAQK01010294
261299
Actinomycetota
GCC
Gly
>WENV078668
AAQK01005614
261298
Actinomycetota
CGT
Thr
>WENV078540
AAQK01000709
139249
Actinomycetota
GTC
Asp
>WENV078737
AAQK01009504
261336
Actinomycetota
GTT
Asn
>WENV078603
AAQK01003616
369047
Actinomycetota
TTC
Glu
>WENV078575
AAQK01002072
167861
Actinomycetota
CAA
Leu
>WENV078672
AAQK01006219
469498
Actinomycetota
CCC
Gly
>WENV078761
AAQK01010085
162411
Actinomycetota
CCG
Arg
>WENV078545
AAQK01000901
288631
Actinomycetota
CCT
Arg
>WENV078604
AAQK01003616
161068
Actinomycetota
>WENV078710
AAQK01008580
26694
Actinomycetota
TGA
Ser
>WENV078636
AAQK01004473
328213
Actinomycetota
GTT
Asn
>WENV078676
AAQK01006249
328213
Actinomycetota
GTT
Asn
>WENV078736
AAQK01009504
328213
Actinomycetota
GTT
Asn
>WENV078549
AAQK01000986
257318
Actinomycetota
TGC
Ala
>WENV078617
AAQK01004177
162454
Actinomycetota
TCT
Arg
>WENV078581
AAQK01002325
18632
Actinomycetota
GGA
Ser
>WENV078618
AAQK01004218
261442
Actinomycetota
CCA
Trp
>WENV078586
AAQK01002542
471398
Actinomycetota
TTG
Gln
>WENV078708
AAQK01008160
158695
Actinomycetota
ACG
Arg
>WENV078633
AAQK01004449
76252
Actinomycetota
CAG
Leu
>WENV078657
AAQK01005393
324950
Actinomycetota
TGC
Ala
>WENV078632
AAQK01004440
43294
Actinomycetota
CGA
Ser
>WENV078743
AAQK01009708
124817
Actinomycetota
TAG
Leu
>WENV078552
AAQK01001086
261304
Actinomycetota
GAA
Phe
>WENV078731
AAQK01009280
162413
Actinomycetota
TTC
Glu
>WENV078701
AAQK01007707
392260
Actinomycetota
CAC
Val
>WENV078765
AAQK01010113
116981
Actinomycetota
GTA
Tyr
>WENV078554
AAQK01001129
257872
Actinomycetota
CGT
Thr
>WENV078766
AAQK01010113
158694
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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