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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV09001806
ACQI01008886
382010
Gammaproteobacteria
TCC
Gly
>ENV09001914
ACQI01025638
382010
Gammaproteobacteria
TCC
Gly
>ENV09001655
ACQI01000768
312307
Gammaproteobacteria
TGC
Ala
>ENV09001683
ACQI01002148
312307
Gammaproteobacteria
TGC
Ala
>ENV09001765
ACQI01005272
312307
Gammaproteobacteria
TGC
Ala
>ENV09001645
ACQI01000296
124744
Gammaproteobacteria
TAG
Leu
>ENV09001646
ACQI01000296
161184
Gammaproteobacteria
>ENV09001654
ACQI01000740
171915
Gammaproteobacteria
GAC
Val
>ENV09001805
ACQI01008886
108760
Gammaproteobacteria
GTA
Tyr
>ENV09001751
ACQI01004891
159176
Gammaproteobacteria
GAC
Val
>ENV09001716
ACQI01003520
314691
Gammaproteobacteria
TAC
Val
>ENV09001718
ACQI01003520
314691
Gammaproteobacteria
TAC
Val
>ENV09001766
ACQI01005275
314691
Gammaproteobacteria
TAC
Val
>ENV09001768
ACQI01005275
314691
Gammaproteobacteria
TAC
Val
>ENV09001790
ACQI01006182
314691
Gammaproteobacteria
TAC
Val
>ENV09001640
ACQI01000216
259519
Gammaproteobacteria
GGC
Ala
>ENV09001697
ACQI01002843
259519
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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