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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11100338
AEKF01000082
257715
Bacillota
GTG
His
>WENV11100319
AEKF01000056
258633
Bacillota
GGT
Thr
>WENV11100333
AEKF01000082
451390
Bacillota
GCA
Cys
>WENV11100297
AEKF01000031
369759
Bacillota
TCC
Gly
>WENV11100351
AEKF01000096
369759
Bacillota
TCC
Gly
>WENV11100352
AEKF01000096
369759
Bacillota
TCC
Gly
>WENV11100326
AEKF01000075
280157
Bacillota
AGT
Thr
>WENV11100251
AEKF01000001
369143
Bacillota
TTC
Glu
>WENV11100278
AEKF01000007
369143
Bacillota
TTC
Glu
>WENV11100343
AEKF01000096
69443
Bacillota
TAA
Leu
>WENV11100356
AEKF01000107
383323
Bacillota
CTG
Gln
>WENV11100290
AEKF01000023
91701
Bacillota
GTA
Tyr
>WENV11100358
AEKF01000126
369785
Bacillota
TTG
Gln
>WENV11100312
AEKF01000039
257532
Bacillota
GTG
His
>WENV11100282
AEKF01000010
64774
Bacillota
CAG
Leu
>WENV11100348
AEKF01000096
8082
Bacillota
>WENV11100249
AEKF01000001
11975
Bacillota
CGA
Ser
>WENV11100293
AEKF01000024
7911
Bacillota
>WENV11100334
AEKF01000082
317186
Bacillota
TAC
Val
>WENV11100340
AEKF01000096
317186
Bacillota
TAC
Val
>WENV11100324
AEKF01000075
258636
Bacillota
GTT
Asn
>WENV11100289
AEKF01000021
257541
Bacillota
CCT
Arg
>WENV11100275
AEKF01000007
88669
Bacillota
GTA
Tyr
>WENV11100328
AEKF01000078
88669
Bacillota
GTA
Tyr
>WENV11100357
AEKF01000126
88669
Bacillota
GTA
Tyr
>WENV11100277
AEKF01000007
18281
Bacillota
GCT
Ser
>WENV11100296
AEKF01000029
12028
Bacillota
CGA
Ser
>WENV11100306
AEKF01000039
5405
Bacillota
TGA
Ser
>WENV11100323
AEKF01000074
5405
Bacillota
TGA
Ser
>WENV11100253
AEKF01000002
158826
Bacillota
>WENV11100315
AEKF01000039
64974
Bacillota
CAA
Leu
>WENV11100286
AEKF01000017
369139
Bacillota
>WENV11100327
AEKF01000075
169585
Bacillota
ACG
Arg
>WENV11100344
AEKF01000096
169585
Bacillota
ACG
Arg
>WENV11100272
AEKF01000006
257539
Bacillota
CGT
Thr
>WENV11100332
AEKF01000080
230927
Bacillota
TGG
Pro
>WENV11100345
AEKF01000096
230927
Bacillota
TGG
Pro
>WENV11100341
AEKF01000096
280158
Bacillota
TTT
Lys
>WENV11100342
AEKF01000096
261279
Bacillota
TGT
Thr
>WENV11100325
AEKF01000075
90121
Bacillota
TAG
Leu
>WENV11100320
AEKF01000066
369757
Bacillota
TTC
Glu
>WENV11100331
AEKF01000079
369757
Bacillota
TTC
Glu
>WENV11100353
AEKF01000096
179785
Bacillota
GAT
Ile
>WENV11100270
AEKF01000006
257538
Bacillota
GTT
Asn
>WENV11100271
AEKF01000006
257538
Bacillota
GTT
Asn
>WENV11100250
AEKF01000001
158833
Bacillota
TCT
Arg
>WENV11100294
AEKF01000027
280159
Bacillota
CTT
Lys
>WENV11100318
AEKF01000054
280159
Bacillota
CTT
Lys
>WENV11100285
AEKF01000016
383324
Bacillota
CCG
Arg
>WENV11100273
AEKF01000006
369141
Bacillota
CTG
Gln
>WENV11100284
AEKF01000013
369144
Bacillota
GTT
Asn
>WENV11100316
AEKF01000040
369144
Bacillota
GTT
Asn
>WENV11100321
AEKF01000066
377493
Bacillota
CTC
Glu
>WENV11100310
AEKF01000039
127643
Bacillota
GTA
Tyr
>WENV11100336
AEKF01000082
259110
Bacillota
GAA
Phe
>WENV11100350
AEKF01000096
259110
Bacillota
GAA
Phe
>WENV11100292
AEKF01000024
67023
Bacillota
AAG
Leu
>WENV11100279
AEKF01000007
105130
Bacillota
TAG
Leu
>WENV11100301
AEKF01000039
159803
Bacillota
GTC
Asp
>WENV11100308
AEKF01000039
159803
Bacillota
GTC
Asp
>WENV11100335
AEKF01000082
159803
Bacillota
GTC
Asp
>WENV11100349
AEKF01000096
159803
Bacillota
GTC
Asp
>WENV11100330
AEKF01000078
49745
Bacillota
AAG
Leu
>WENV11100347
AEKF01000096
179784
Bacillota
>WENV11100276
AEKF01000007
369140
Bacillota
TTG
Gln
>WENV11100329
AEKF01000078
369140
Bacillota
TTG
Gln
>WENV11100269
AEKF01000006
369145
Bacillota
CTC
Glu
>WENV11100339
AEKF01000082
69442
Bacillota
CAA
Leu
>WENV11100322
AEKF01000069
159798
Bacillota
TCT
Arg
>WENV11100291
AEKF01000023
383325
Bacillota
TTG
Gln
>WENV11100280
AEKF01000009
158827
Bacillota
TTT
Lys
>WENV11100281
AEKF01000009
448142
Bacillota
GCA
Cys
>WENV11100355
AEKF01000106
22931
Bacillota
CGA
Ser
>WENV11100346
AEKF01000096
207345
Bacillota
CAT
Met
>WENV11100337
AEKF01000082
454519
Bacillota
CCA
Trp
>WENV11100268
AEKF01000006
64776
Bacillota
CAA
Leu
>WENV11100304
AEKF01000039
20603
Bacillota
GCT
Ser
>WENV11100354
AEKF01000096
18393
Bacillota
GCT
Ser
>WENV11100313
AEKF01000039
377728
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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