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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11100464
AERA01011478
259737
Alphaproteobacteria
GAA
Phe
>WENV170000106
AERA01011478
259737
Alphaproteobacteria
GAA
Phe
>WENV11100574
AERA01026162
32703
Alphaproteobacteria
GGA
Ser
>WENV170000216
AERA01026162
32703
Alphaproteobacteria
GGA
Ser
>WENV11100545
AERA01021665
380115
Alphaproteobacteria
TAC
Val
>WENV170000187
AERA01021665
380115
Alphaproteobacteria
TAC
Val
>WENV11100432
AERA01005798
271426
Alphaproteobacteria
CGT
Thr
>WENV170000074
AERA01005798
271426
Alphaproteobacteria
CGT
Thr
>WENV11100576
AERA01026994
383093
Alphaproteobacteria
GAC
Val
>WENV170000218
AERA01026994
383093
Alphaproteobacteria
GAC
Val
>WENV11100386
AERA01001633
397242
Alphaproteobacteria
CCC
Gly
>WENV170000028
AERA01001633
397242
Alphaproteobacteria
CCC
Gly
>WENV11100447
AERA01008405
184728
Alphaproteobacteria
CGG
Pro
>WENV11100512
AERA01018117
395582
Alphaproteobacteria
CTC
Glu
>WENV170000154
AERA01018117
395582
Alphaproteobacteria
CTC
Glu
>WENV11100392
AERA01002166
315293
Alphaproteobacteria
>WENV11100426
AERA01005118
461210
Alphaproteobacteria
CTG
Gln
>WENV11100437
AERA01006199
461210
Alphaproteobacteria
CTG
Gln
>WENV170000068
AERA01005118
461210
Alphaproteobacteria
CTG
Gln
>WENV170000079
AERA01006199
461210
Alphaproteobacteria
CTG
Gln
>WENV11100377
AERA01001033
374142
Alphaproteobacteria
TTG
Gln
>WENV170000019
AERA01001033
374142
Alphaproteobacteria
TTG
Gln
>WENV11100486
AERA01013966
400307
Alphaproteobacteria
CAC
Val
>WENV170000128
AERA01013966
400307
Alphaproteobacteria
CAC
Val
>WENV11100457
AERA01011059
307687
Alphaproteobacteria
GGC
Ala
>WENV170000099
AERA01011059
307687
Alphaproteobacteria
GGC
Ala
>WENV11100372
AERA01000858
165995
Alphaproteobacteria
GTC
Asp
>WENV170000014
AERA01000858
165995
Alphaproteobacteria
GTC
Asp
>WENV170000015
AERA01000907
219821
Alphaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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