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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11100641
AEWW01003151
114882
Gammaproteobacteria
GTA
Tyr
>WENV11100652
AEWW01004354
114882
Gammaproteobacteria
GTA
Tyr
>WENV11100670
AEWW01009139
114882
Gammaproteobacteria
GTA
Tyr
>WENV11100764
AEWW01026204
114882
Gammaproteobacteria
GTA
Tyr
>WENV11100795
AEWW01032032
114882
Gammaproteobacteria
GTA
Tyr
>WENV11100687
AEWW01013356
50136
Gammaproteobacteria
TGA
Ser
>WENV11100688
AEWW01013356
50136
Gammaproteobacteria
TGA
Ser
>WENV170000330
AEWW01013356
50136
Gammaproteobacteria
TGA
Ser
>WENV11100711
AEWW01016820
407385
Gammaproteobacteria
CCT
Arg
>WENV11100771
AEWW01026499
407385
Gammaproteobacteria
CCT
Arg
>WENV170000353
AEWW01016820
407385
Gammaproteobacteria
CCT
Arg
>WENV170000413
AEWW01026499
407385
Gammaproteobacteria
CCT
Arg
>WENV11100742
AEWW01022855
51437
Gammaproteobacteria
GAG
Leu
>WENV170000384
AEWW01022855
51437
Gammaproteobacteria
GAG
Leu
>WENV11100686
AEWW01011962
49734
Gammaproteobacteria
GGA
Ser
>WENV170000328
AEWW01011962
49734
Gammaproteobacteria
GGA
Ser
>WENV11100821
AEWW01036407
312307
Gammaproteobacteria
TGC
Ala
>WENV11100829
AEWW01039947
312307
Gammaproteobacteria
TGC
Ala
>WENV11100653
AEWW01004558
159797
Gammaproteobacteria
GGG
Pro
>WENV170000295
AEWW01004558
159797
Gammaproteobacteria
GGG
Pro
>WENV11100827
AEWW01039273
4094
Gammaproteobacteria
>WENV170000469
AEWW01039273
4094
Gammaproteobacteria
>WENV170000417
AEWW01027279
78780
Gammaproteobacteria
CAG
Leu
>WENV170000459
AEWW01035562
78780
Gammaproteobacteria
CAG
Leu
>WENV11100692
AEWW01014402
257938
Gammaproteobacteria
GGG
Pro
>WENV170000334
AEWW01014402
257938
Gammaproteobacteria
GGG
Pro
>WENV11100646
AEWW01004136
179423
Gammaproteobacteria
CAT
Met
>WENV11100712
AEWW01016985
166987
Gammaproteobacteria
GGG
Pro
>WENV170000354
AEWW01016985
166987
Gammaproteobacteria
GGG
Pro
>WENV11100673
AEWW01010124
278490
Gammaproteobacteria
GAC
Val
>WENV170000315
AEWW01010124
278490
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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