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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11101341
AGBE01001898
163035
Nitrososphaerota
GGC
Ala
>WENV11101366
AGBE01002037
163035
Nitrososphaerota
GGC
Ala
>WENV11101311
AGBE01000829
163041
Nitrososphaerota
TCC
Gly
>WENV11101321
AGBE01001198
163041
Nitrososphaerota
TCC
Gly
>WENV11101372
AGBE01002042
163041
Nitrososphaerota
TCC
Gly
>WENV11101382
AGBE01002126
163041
Nitrososphaerota
TCC
Gly
>WENV11101383
AGBE01002132
163041
Nitrososphaerota
TCC
Gly
>WENV11101355
AGBE01002006
163034
Nitrososphaerota
GCC
Gly
>WENV11101381
AGBE01002125
163034
Nitrososphaerota
GCC
Gly
>WENV11101301
AGBE01000320
139965
Nitrososphaerota
>WENV11101305
AGBE01000477
139965
Nitrososphaerota
>WENV11101348
AGBE01001941
139965
Nitrososphaerota
>WENV11101350
AGBE01001952
139965
Nitrososphaerota
>WENV11101303
AGBE01000362
139339
Nitrososphaerota
GAT
Ile
>WENV11101333
AGBE01001837
139339
Nitrososphaerota
GAT
Ile
>WENV11101386
AGBE01002138
139339
Nitrososphaerota
GAT
Ile
>WENV11101390
AGBE01002141
139339
Nitrososphaerota
GAT
Ile
>WENV11101327
AGBE01001473
261940
Nitrososphaerota
TTG
Gln
>WENV11101393
AGBE01002153
261940
Nitrososphaerota
TTG
Gln
>WENV11101307
AGBE01000556
163036
Nitrososphaerota
>WENV11101326
AGBE01001469
163036
Nitrososphaerota
>WENV11101343
AGBE01001909
163036
Nitrososphaerota
>WENV11101363
AGBE01002035
163036
Nitrososphaerota
>WENV11101314
AGBE01000953
163669
Nitrososphaerota
GTT
Asn
>WENV11101378
AGBE01002115
163669
Nitrososphaerota
GTT
Asn
>WENV11101308
AGBE01000667
371796
Nitrososphaerota
>WENV11101319
AGBE01001109
371796
Nitrososphaerota
>WENV11101376
AGBE01002111
371796
Nitrososphaerota
>WENV11101387
AGBE01002140
371796
Nitrososphaerota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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