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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170003704
AGTN01421320
202065
Alphaproteobacteria
CCT
Arg
>WENV170004211
AGTN01605755
95477
Alphaproteobacteria
GTA
Tyr
>WENV170004536
AGTN01711507
202800
Alphaproteobacteria
ACG
Arg
>WENV170004186
AGTN01591851
167505
Alphaproteobacteria
GAT
Ile
>WENV170002491
AGTN01049094
236864
Alphaproteobacteria
CCT
Arg
>WENV170004021
AGTN01537567
236864
Alphaproteobacteria
CCT
Arg
>WENV170004515
AGTN01706398
236864
Alphaproteobacteria
CCT
Arg
>WENV170002545
AGTN01063575
151518
Alphaproteobacteria
GGG
Pro
>WENV170004633
AGTN01742124
151518
Alphaproteobacteria
GGG
Pro
>WENV170003065
AGTN01215879
108926
Alphaproteobacteria
GTA
Tyr
>WENV170002755
AGTN01119903
228004
Alphaproteobacteria
ACG
Arg
>WENV170004116
AGTN01565027
228004
Alphaproteobacteria
ACG
Arg
>WENV170002547
AGTN01064447
257917
Alphaproteobacteria
GGC
Ala
>WENV170003240
AGTN01271070
199392
Alphaproteobacteria
TGG
Pro
>WENV170003911
AGTN01498911
160313
Alphaproteobacteria
>WENV170002610
AGTN01083078
448652
Alphaproteobacteria
CTG
Gln
>WENV170003639
AGTN01403158
396032
Alphaproteobacteria
TTG
Gln
>WENV170002831
AGTN01141910
369482
Alphaproteobacteria
GAC
Val
>WENV170002708
AGTN01109922
269336
Alphaproteobacteria
TTT
Lys
>WENV170004410
AGTN01670289
108999
Alphaproteobacteria
TAG
Leu
>WENV170003212
AGTN01261582
453256
Alphaproteobacteria
CTG
Gln
>WENV170003614
AGTN01397045
448084
Alphaproteobacteria
GCA
Cys
>WENV170002926
AGTN01170993
370393
Alphaproteobacteria
TTT
Lys
>WENV170002500
AGTN01051492
105568
Alphaproteobacteria
GAG
Leu
>WENV170002939
AGTN01174324
66417
Alphaproteobacteria
GAG
Leu
>WENV170004223
AGTN01609712
66417
Alphaproteobacteria
GAG
Leu
>WENV170003526
AGTN01367344
295849
Alphaproteobacteria
CCA
Trp
>WENV170003780
AGTN01447948
383286
Alphaproteobacteria
GGT
Thr
>WENV170002457
AGTN01036970
374953
Alphaproteobacteria
CAT
Met
>WENV170002997
AGTN01188759
374953
Alphaproteobacteria
CAT
Met
>WENV170002896
AGTN01163267
184235
Alphaproteobacteria
GTC
Asp
>WENV170004539
AGTN01712833
184235
Alphaproteobacteria
GTC
Asp
>WENV170004042
AGTN01544070
382620
Alphaproteobacteria
GCC
Gly
>WENV170003668
AGTN01412765
377038
Alphaproteobacteria
GGT
Thr
>WENV170002821
AGTN01139326
160215
Alphaproteobacteria
CAT
Met
>WENV170004332
AGTN01642616
222035
Alphaproteobacteria
TGG
Pro
>WENV170003374
AGTN01317497
169447
Alphaproteobacteria
CCT
Arg
>WENV170002484
AGTN01046440
268438
Alphaproteobacteria
GGT
Thr
>WENV170002519
AGTN01057876
259213
Alphaproteobacteria
GGC
Ala
>WENV170002606
AGTN01081945
269327
Alphaproteobacteria
GTT
Asn
>WENV170003949
AGTN01511467
269327
Alphaproteobacteria
GTT
Asn
>WENV170003672
AGTN01413771
106863
Alphaproteobacteria
TAG
Leu
>WENV170003199
AGTN01258076
259739
Alphaproteobacteria
TTC
Glu
>WENV170004047
AGTN01544953
259739
Alphaproteobacteria
TTC
Glu
>WENV170003711
AGTN01423366
268926
Alphaproteobacteria
GTG
His
>WENV170003940
AGTN01508422
258338
Alphaproteobacteria
TTT
Lys
>WENV170002346
AGTN01000706
375074
Alphaproteobacteria
GGT
Thr
>WENV170004351
AGTN01650328
114867
Alphaproteobacteria
CAG
Leu
>WENV170003066
AGTN01216180
236538
Alphaproteobacteria
GAT
Ile
>WENV170004067
AGTN01549928
268928
Alphaproteobacteria
>WENV170002753
AGTN01119026
108927
Alphaproteobacteria
TAG
Leu
>WENV170002837
AGTN01144116
26267
Alphaproteobacteria
TGA
Ser
>WENV170003188
AGTN01253838
169536
Alphaproteobacteria
GTG
His
>WENV170002471
AGTN01040859
259352
Alphaproteobacteria
CGC
Ala
>WENV170003500
AGTN01359637
259352
Alphaproteobacteria
CGC
Ala
>WENV170003726
AGTN01428251
411790
Alphaproteobacteria
TTG
Gln
>WENV170002668
AGTN01096161
21235
Alphaproteobacteria
GGA
Ser
>WENV170002359
AGTN01003240
26345
Alphaproteobacteria
GCT
Ser
>WENV170002817
AGTN01138147
400307
Alphaproteobacteria
CAC
Val
>WENV170002373
AGTN01011325
5399
Alphaproteobacteria
GCT
Ser
>WENV170003957
AGTN01514278
377106
Alphaproteobacteria
GTT
Asn
>WENV170003433
AGTN01331913
170019
Alphaproteobacteria
CCT
Arg
>WENV170003982
AGTN01524782
270852
Alphaproteobacteria
TTT
Lys
>WENV170004382
AGTN01665013
380852
Alphaproteobacteria
CAC
Val
>WENV170002460
AGTN01037476
307687
Alphaproteobacteria
GGC
Ala
>WENV170002739
AGTN01114138
316883
Alphaproteobacteria
TGC
Ala
>WENV170004452
AGTN01683384
403408
Alphaproteobacteria
TTG
Gln
>WENV170004206
AGTN01600960
451399
Alphaproteobacteria
GCA
Cys
>WENV170002838
AGTN01144449
160556
Alphaproteobacteria
CCT
Arg
>WENV170004489
AGTN01698311
6111
Alphaproteobacteria
GCT
Ser
>WENV170003161
AGTN01245788
166369
Alphaproteobacteria
>WENV170003581
AGTN01384322
106862
Alphaproteobacteria
GAG
Leu
>WENV170003210
AGTN01260743
205695
Alphaproteobacteria
GGG
Pro
>WENV170003437
AGTN01333537
448086
Alphaproteobacteria
CTG
Gln
>WENV170003785
AGTN01450763
232056
Alphaproteobacteria
GAT
Ile
>WENV170004019
AGTN01537553
232056
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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