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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170004255
AGTN01618419
131007
Bacillota
TAG
Leu
>WENV170003412
AGTN01326896
290948
Bacillota
TTT
Lys
>WENV170003671
AGTN01413392
212767
Bacillota
CCT
Arg
>WENV170004595
AGTN01733793
375946
Bacillota
TTC
Glu
>WENV170003381
AGTN01319855
324257
Bacillota
CCA
Trp
>WENV170003955
AGTN01514099
370311
Bacillota
GCC
Gly
>WENV170003740
AGTN01433910
261452
Bacillota
GCC
Gly
>WENV170004251
AGTN01618419
179237
Bacillota
TCT
Arg
>WENV170004344
AGTN01648483
235234
Bacillota
GAT
Ile
>WENV170002802
AGTN01134555
266085
Bacillota
TGT
Thr
>WENV170003569
AGTN01379433
268856
Bacillota
TGG
Pro
>WENV170002898
AGTN01163862
293469
Bacillota
GTT
Asn
>WENV170003353
AGTN01307380
293469
Bacillota
GTT
Asn
>WENV170003420
AGTN01329456
184565
Bacillota
GAT
Ile
>WENV170003517
AGTN01366485
450517
Bacillota
GCA
Cys
>WENV170002434
AGTN01028558
272758
Bacillota
GCC
Gly
>WENV170003524
AGTN01367264
268483
Bacillota
CTT
Lys
>WENV170002681
AGTN01099351
106802
Bacillota
GTA
Tyr
>WENV170003016
AGTN01197041
261561
Bacillota
TGC
Ala
>WENV170003340
AGTN01304609
450511
Bacillota
TCC
Gly
>WENV170002512
AGTN01055409
270841
Bacillota
CCA
Trp
>WENV170003410
AGTN01326896
170691
Bacillota
TCT
Arg
>WENV170002532
AGTN01059369
402178
Bacillota
TTC
Glu
>WENV170003793
AGTN01452663
402178
Bacillota
TTC
Glu
>WENV170004050
AGTN01545974
402178
Bacillota
TTC
Glu
>WENV170003081
AGTN01223199
410479
Bacillota
GCC
Gly
>WENV170003329
AGTN01300507
116390
Bacillota
GTA
Tyr
>WENV170003536
AGTN01369410
272606
Bacillota
TTC
Glu
>WENV170003164
AGTN01247011
275789
Bacillota
GGT
Thr
>WENV170004551
AGTN01716318
275789
Bacillota
GGT
Thr
>WENV170002619
AGTN01085420
295607
Bacillota
TTT
Lys
>WENV170003681
AGTN01416284
370406
Bacillota
TTC
Glu
>WENV170002808
AGTN01135654
280142
Bacillota
TTT
Lys
>WENV170003525
AGTN01367264
381674
Bacillota
CTC
Glu
>WENV170004427
AGTN01674860
308738
Bacillota
TTG
Gln
>WENV170004446
AGTN01680363
308738
Bacillota
TTG
Gln
>WENV170002825
AGTN01140020
218405
Bacillota
GTC
Asp
>WENV170004010
AGTN01534372
218405
Bacillota
GTC
Asp
>WENV170002885
AGTN01157669
258604
Bacillota
TGC
Ala
>WENV170004254
AGTN01618419
279450
Bacillota
TTT
Lys
>WENV170002397
AGTN01018049
266086
Bacillota
GGT
Thr
>WENV170004253
AGTN01618419
408016
Bacillota
TTG
Gln
>WENV170003713
AGTN01424537
377818
Bacillota
GTT
Asn
>WENV170004512
AGTN01705463
377818
Bacillota
GTT
Asn
>WENV170004029
AGTN01541211
270854
Bacillota
TTC
Glu
>WENV170003649
AGTN01405896
18312
Bacillota
TGA
Ser
>WENV170003862
AGTN01477829
18312
Bacillota
TGA
Ser
>WENV170002941
AGTN01174659
257810
Bacillota
TGG
Pro
>WENV170003492
AGTN01354492
277390
Bacillota
CTT
Lys
>WENV170002657
AGTN01094379
222762
Bacillota
GTC
Asp
>WENV170003983
AGTN01525398
222762
Bacillota
GTC
Asp
>WENV170004630
AGTN01742087
222762
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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