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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170003139
AGTN01236657
132570
Bacteroidota
CAA
Leu
>WENV170004319
AGTN01636456
132570
Bacteroidota
CAA
Leu
>WENV170004491
AGTN01698676
132570
Bacteroidota
CAA
Leu
>WENV170003609
AGTN01395405
454155
Bacteroidota
GCA
Cys
>WENV170004149
AGTN01577971
369587
Bacteroidota
TTC
Glu
>WENV170002502
AGTN01052022
53810
Bacteroidota
TGA
Ser
>WENV170002504
AGTN01052447
65111
Bacteroidota
CAA
Leu
>WENV170002482
AGTN01045659
124735
Bacteroidota
GTA
Tyr
>WENV170002958
AGTN01179745
159589
Bacteroidota
>WENV170004626
AGTN01741215
138865
Bacteroidota
>WENV170002644
AGTN01091393
293347
Bacteroidota
CCA
Trp
>WENV170004001
AGTN01531727
34995
Bacteroidota
GGA
Ser
>WENV170004625
AGTN01741215
68627
Bacteroidota
GCT
Ser
>WENV170003355
AGTN01310818
167945
Bacteroidota
GTT
Asn
>WENV170003479
AGTN01351155
171098
Bacteroidota
>WENV170003026
AGTN01201172
237987
Bacteroidota
CAT
Met
>WENV170002643
AGTN01091393
402298
Bacteroidota
GGT
Thr
>WENV170003831
AGTN01465688
258386
Bacteroidota
TTT
Lys
>WENV170003056
AGTN01212681
161247
Bacteroidota
CGG
Pro
>WENV170003742
AGTN01434251
285851
Bacteroidota
GCC
Gly
>WENV170003761
AGTN01440239
285851
Bacteroidota
GCC
Gly
>WENV170004136
AGTN01573480
65274
Bacteroidota
GAG
Leu
>WENV170002478
AGTN01044957
142773
Bacteroidota
TGG
Pro
>WENV170003283
AGTN01284793
258391
Bacteroidota
CTT
Lys
>WENV170003317
AGTN01295560
257182
Bacteroidota
>WENV170002987
AGTN01185745
448064
Bacteroidota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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