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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170004921
AJWZ01001029
42103
Bacillota
TGA
Ser
>WENV170004924
AJWZ01001164
257968
Bacillota
GCC
Gly
>WENV170004949
AJWZ01002746
257968
Bacillota
GCC
Gly
>WENV170005021
AJWZ01010137
257968
Bacillota
GCC
Gly
>WENV170005079
AJWZ01012024
371253
Bacillota
TTG
Gln
>WENV170004943
AJWZ01002338
292839
Bacillota
TAC
Val
>WENV170005020
AJWZ01010137
257970
Bacillota
GAA
Phe
>WENV170004946
AJWZ01002455
392172
Bacillota
TTC
Glu
>WENV170005059
AJWZ01011612
258854
Bacillota
TGC
Ala
>WENV170004995
AJWZ01007090
162469
Bacillota
GTC
Asp
>WENV170004956
AJWZ01003215
286917
Bacillota
TGC
Ala
>WENV170004945
AJWZ01002412
269973
Bacillota
CCA
Trp
>WENV170004955
AJWZ01003064
159089
Bacillota
GAT
Ile
>WENV170004930
AJWZ01001395
275476
Bacillota
TGC
Ala
>WENV170004957
AJWZ01003215
166292
Bacillota
GAT
Ile
>WENV170004991
AJWZ01007090
371252
Bacillota
GTT
Asn
>WENV170004963
AJWZ01003669
182424
Bacillota
CAT
Met
>WENV170004978
AJWZ01005539
159236
Bacillota
GTT
Asn
>WENV170004927
AJWZ01001269
105955
Bacillota
TAG
Leu
>WENV170004985
AJWZ01005951
159816
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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