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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014593
AYRH01026213
396582
Alphaproteobacteria
GAC
Val
>WENV170014600
AYRH01031973
107535
Alphaproteobacteria
GTA
Tyr
>WENV170014549
AYRH01005133
159552
Alphaproteobacteria
TGG
Pro
>WENV170014532
AYRH01001199
409499
Alphaproteobacteria
TTG
Gln
>WENV170014550
AYRH01005545
258846
Alphaproteobacteria
CGT
Thr
>WENV170014558
AYRH01008062
263418
Alphaproteobacteria
TTT
Lys
>WENV170014568
AYRH01011804
34180
Alphaproteobacteria
CGA
Ser
>WENV170014553
AYRH01006620
258840
Alphaproteobacteria
GGC
Ala
>WENV170014537
AYRH01001924
159974
Alphaproteobacteria
GGG
Pro
>WENV170014556
AYRH01007522
201901
Alphaproteobacteria
CAT
Met
>WENV170014533
AYRH01001324
159966
Alphaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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