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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015296
AZIG01001124
454593
Alphaproteobacteria
GCA
Cys
>WENV170015300
AZIG01001292
453062
Alphaproteobacteria
CCC
Gly
>WENV170015381
AZIG01005016
26204
Alphaproteobacteria
CGA
Ser
>WENV170015288
AZIG01000439
380306
Alphaproteobacteria
GGT
Thr
>WENV170015443
AZIG01007057
259585
Alphaproteobacteria
CCA
Trp
>WENV170015360
AZIG01004251
125595
Alphaproteobacteria
>WENV170015404
AZIG01006058
125595
Alphaproteobacteria
>WENV170015401
AZIG01005726
159282
Alphaproteobacteria
TCT
Arg
>WENV170015329
AZIG01002834
177263
Alphaproteobacteria
ACG
Arg
>WENV170015289
AZIG01000467
159281
Alphaproteobacteria
GTG
His
>WENV170015294
AZIG01000823
67505
Alphaproteobacteria
TAA
Leu
>WENV170015426
AZIG01006464
451392
Alphaproteobacteria
TCC
Gly
>WENV170015429
AZIG01006650
159287
Alphaproteobacteria
CGG
Pro
>WENV170015303
AZIG01001584
26205
Alphaproteobacteria
GGA
Ser
>WENV170015419
AZIG01006376
369406
Alphaproteobacteria
GAC
Val
>WENV170015313
AZIG01002411
89275
Alphaproteobacteria
GAG
Leu
>WENV170015295
AZIG01001053
26236
Alphaproteobacteria
CGA
Ser
>WENV170015273
AZIG01000026
167088
Alphaproteobacteria
CCG
Arg
>WENV170015376
AZIG01004594
88722
Alphaproteobacteria
CAG
Leu
>WENV170015341
AZIG01003356
175700
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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