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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015724
AZII01005223
466478
Gammaproteobacteria
GCA
Cys
>WENV170015674
AZII01002545
108980
Gammaproteobacteria
TAG
Leu
>WENV170015770
AZII01008292
65192
Gammaproteobacteria
CAG
Leu
>WENV170015765
AZII01007414
160668
Gammaproteobacteria
CAT
Met
>WENV170015741
AZII01005866
206655
Gammaproteobacteria
GTC
Asp
>WENV170015640
AZII01000471
163267
Gammaproteobacteria
>WENV170015646
AZII01000795
163267
Gammaproteobacteria
>WENV170015777
AZII01008552
260947
Gammaproteobacteria
TTG
Gln
>WENV170015655
AZII01001313
170822
Gammaproteobacteria
CCG
Arg
>WENV170015805
AZII01010439
170822
Gammaproteobacteria
CCG
Arg
>WENV170015803
AZII01010404
65163
Gammaproteobacteria
CAA
Leu
>WENV170015795
AZII01009827
50077
Gammaproteobacteria
GGA
Ser
>WENV170015637
AZII01000422
272540
Gammaproteobacteria
GTT
Asn
>WENV170015701
AZII01003820
272540
Gammaproteobacteria
GTT
Asn
>WENV170015643
AZII01000740
256945
Gammaproteobacteria
GAA
Phe
>WENV170015786
AZII01009150
256945
Gammaproteobacteria
GAA
Phe
>WENV170015691
AZII01003361
448699
Gammaproteobacteria
GCA
Cys
>WENV170015632
AZII01000219
105140
Gammaproteobacteria
TAG
Leu
>WENV170015677
AZII01002546
282654
Gammaproteobacteria
GGC
Ala
>WENV170015678
AZII01002590
161939
Gammaproteobacteria
GAC
Val
>WENV170015679
AZII01002620
306475
Gammaproteobacteria
GTG
His
>WENV170015633
AZII01000253
290512
Gammaproteobacteria
TGT
Thr
>WENV170015672
AZII01002428
51060
Gammaproteobacteria
GGA
Ser
>WENV170015693
AZII01003370
51060
Gammaproteobacteria
GGA
Ser
>WENV170015705
AZII01004101
89220
Gammaproteobacteria
GAG
Leu
>WENV170015685
AZII01002909
178799
Gammaproteobacteria
>WENV170015730
AZII01005422
90637
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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