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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170016238
AZIJ01017841
256989
Gammaproteobacteria
TAC
Val
>WENV170016054
AZIJ01010868
28107
Gammaproteobacteria
CGA
Ser
>WENV170016227
AZIJ01017521
256881
Gammaproteobacteria
GTG
His
>WENV170016193
AZIJ01015467
163310
Gammaproteobacteria
>WENV170016093
AZIJ01012402
18367
Gammaproteobacteria
GCT
Ser
>WENV170015893
AZIJ01003348
188985
Gammaproteobacteria
CAT
Met
>WENV170015859
AZIJ01001928
307335
Gammaproteobacteria
TGT
Thr
>WENV170015855
AZIJ01001831
68241
Gammaproteobacteria
CAG
Leu
>WENV170015856
AZIJ01001831
68241
Gammaproteobacteria
CAG
Leu
>WENV170015903
AZIJ01003569
61340
Gammaproteobacteria
GGA
Ser
>WENV170016232
AZIJ01017707
160115
Gammaproteobacteria
GGG
Pro
>WENV170016269
AZIJ01018913
160115
Gammaproteobacteria
GGG
Pro
>WENV170016120
AZIJ01013058
160129
Gammaproteobacteria
GAC
Val
>WENV170016185
AZIJ01015039
160129
Gammaproteobacteria
GAC
Val
>WENV170015895
AZIJ01003353
370729
Gammaproteobacteria
CTG
Gln
>WENV170015920
AZIJ01004315
160126
Gammaproteobacteria
CAT
Met
>WENV170015860
AZIJ01001928
370728
Gammaproteobacteria
TCC
Gly
>WENV170015993
AZIJ01006494
105047
Gammaproteobacteria
GTA
Tyr
>WENV170015994
AZIJ01006494
105047
Gammaproteobacteria
GTA
Tyr
>WENV170016090
AZIJ01012401
105047
Gammaproteobacteria
GTA
Tyr
>WENV170016289
AZIJ01019234
159791
Gammaproteobacteria
CCA
Trp
>WENV170016000
AZIJ01006919
259545
Gammaproteobacteria
TAC
Val
>WENV170015935
AZIJ01004679
271381
Gammaproteobacteria
GGC
Ala
>WENV170015960
AZIJ01005555
282403
Gammaproteobacteria
TTT
Lys
>WENV170016293
AZIJ01019268
163267
Gammaproteobacteria
>WENV170016214
AZIJ01017167
18561
Gammaproteobacteria
TGA
Ser
>WENV170016286
AZIJ01019205
260572
Gammaproteobacteria
GTT
Asn
>WENV170016306
AZIJ01022968
158352
Gammaproteobacteria
TGG
Pro
>WENV170015982
AZIJ01006085
160114
Gammaproteobacteria
TCT
Arg
>WENV170015976
AZIJ01006029
474505
Gammaproteobacteria
GCA
Cys
>WENV170016237
AZIJ01017841
260571
Gammaproteobacteria
TAC
Val
>WENV170015986
AZIJ01006095
412618
Gammaproteobacteria
TTG
Gln
>WENV170016253
AZIJ01018414
448070
Gammaproteobacteria
GCA
Cys
>WENV170016177
AZIJ01014587
158354
Gammaproteobacteria
CAT
Met
>WENV170016003
AZIJ01007438
26112
Gammaproteobacteria
GGA
Ser
>WENV170016273
AZIJ01019059
256945
Gammaproteobacteria
GAA
Phe
>WENV170015913
AZIJ01004145
7878
Gammaproteobacteria
GCT
Ser
>WENV170016240
AZIJ01017857
238082
Gammaproteobacteria
GAC
Val
>WENV170016228
AZIJ01017521
106574
Gammaproteobacteria
TAG
Leu
>WENV170015981
AZIJ01006085
160122
Gammaproteobacteria
TGG
Pro
>WENV170015984
AZIJ01006085
160122
Gammaproteobacteria
TGG
Pro
>WENV170016092
AZIJ01012401
290851
Gammaproteobacteria
GGT
Thr
>WENV170015934
AZIJ01004679
318954
Gammaproteobacteria
TTC
Glu
>WENV170016178
AZIJ01014587
368893
Gammaproteobacteria
TTG
Gln
>WENV170016179
AZIJ01014587
368893
Gammaproteobacteria
TTG
Gln
>WENV170016094
AZIJ01012402
214281
Gammaproteobacteria
ACG
Arg
>WENV170015841
AZIJ01000886
282654
Gammaproteobacteria
GGC
Ala
>WENV170015833
AZIJ01000677
98025
Gammaproteobacteria
CAG
Leu
>WENV170015834
AZIJ01000677
98025
Gammaproteobacteria
CAG
Leu
>WENV170015835
AZIJ01000677
98025
Gammaproteobacteria
CAG
Leu
>WENV170016217
AZIJ01017345
324336
Gammaproteobacteria
GTG
His
>WENV170015921
AZIJ01004315
105406
Gammaproteobacteria
TAG
Leu
>WENV170016035
AZIJ01009272
182090
Gammaproteobacteria
GGG
Pro
>WENV170016241
AZIJ01017919
67081
Gammaproteobacteria
CAA
Leu
>WENV170016209
AZIJ01016630
52896
Gammaproteobacteria
GGA
Ser
>WENV170016231
AZIJ01017620
160119
Gammaproteobacteria
CCA
Trp
>WENV170015872
AZIJ01002550
159609
Gammaproteobacteria
ACG
Arg
>WENV170015873
AZIJ01002550
159609
Gammaproteobacteria
ACG
Arg
>WENV170015996
AZIJ01006561
26256
Gammaproteobacteria
CGA
Ser
>WENV170016279
AZIJ01019155
64694
Gammaproteobacteria
GAG
Leu
>WENV170015983
AZIJ01006085
274734
Gammaproteobacteria
GTG
His
>WENV170015910
AZIJ01003570
236600
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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