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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170016608
AZMM01012627
160420
Bacillota
CAT
Met
>WENV170016635
AZMM01018826
383556
Bacillota
GTT
Asn
>WENV170016567
AZMM01001025
41239
Bacillota
TAA
Leu
>WENV170016634
AZMM01018826
41239
Bacillota
TAA
Leu
>WENV170016607
AZMM01012627
259279
Bacillota
GGT
Thr
>WENV170016605
AZMM01011638
160630
Bacillota
CCT
Arg
>WENV170016614
AZMM01018329
369139
Bacillota
>WENV170016623
AZMM01018623
371144
Bacillota
GTT
Asn
>WENV170016561
AZMM01000930
160421
Bacillota
TGG
Pro
>WENV170016646
AZMM01018927
18494
Bacillota
TGA
Ser
>WENV170016541
AZMM01000155
259274
Bacillota
GAA
Phe
>WENV170016588
AZMM01003512
259274
Bacillota
GAA
Phe
>WENV170016636
AZMM01018827
369508
Bacillota
>WENV170016637
AZMM01018827
124752
Bacillota
GTA
Tyr
>WENV170016640
AZMM01018827
124752
Bacillota
GTA
Tyr
>WENV170016643
AZMM01018827
124752
Bacillota
GTA
Tyr
>WENV170016542
AZMM01000155
88873
Bacillota
GAG
Leu
>WENV170016589
AZMM01003512
88873
Bacillota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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