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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086241
BABE01016344
190892
Actinomycetota
CAT
Met
>WENV086219
BABE01015285
190892
Actinomycetota
CAT
Met
>WENV086200
BABE01013461
190892
Actinomycetota
CAT
Met
>WENV086173
BABE01011459
190892
Actinomycetota
CAT
Met
>WENV086144
BABE01009175
190892
Actinomycetota
CAT
Met
>WENV086133
BABE01008000
190892
Actinomycetota
CAT
Met
>WENV086114
BABE01006519
190892
Actinomycetota
CAT
Met
>WENV086105
BABE01004743
190892
Actinomycetota
CAT
Met
>WENV085952
BABE01000007
190892
Actinomycetota
CAT
Met
>WENV086050
BABE01001300
158583
Actinomycetota
GTC
Asp
>WENV085978
BABE01000105
176876
Actinomycetota
CTT
Lys
>WENV085961
BABE01000058
448096
Actinomycetota
TTG
Gln
>WENV086106
BABE01004996
448096
Actinomycetota
TTG
Gln
>WENV085962
BABE01000058
293317
Actinomycetota
GGC
Ala
>WENV085963
BABE01000058
293317
Actinomycetota
GGC
Ala
>WENV086010
BABE01000275
291148
Actinomycetota
TGC
Ala
>WENV085998
BABE01000179
257345
Actinomycetota
CCT
Arg
>WENV086087
BABE01002734
257345
Actinomycetota
CCT
Arg
>WENV086244
BABE01016856
257224
Actinomycetota
CTT
Lys
>WENV086047
BABE01001264
257222
Actinomycetota
GGT
Thr
>WENV085990
BABE01000155
167861
Actinomycetota
CAA
Leu
>WENV086109
BABE01005737
167861
Actinomycetota
CAA
Leu
>WENV086136
BABE01008527
167861
Actinomycetota
CAA
Leu
>WENV086146
BABE01009185
167861
Actinomycetota
CAA
Leu
>WENV086231
BABE01015998
167861
Actinomycetota
CAA
Leu
>WENV085975
BABE01000095
133430
Actinomycetota
TAA
Leu
>WENV085954
BABE01000032
159159
Actinomycetota
TGG
Pro
>WENV086125
BABE01006686
159159
Actinomycetota
TGG
Pro
>WENV086147
BABE01009212
159159
Actinomycetota
TGG
Pro
>WENV086181
BABE01012157
159159
Actinomycetota
TGG
Pro
>WENV086242
BABE01016724
159159
Actinomycetota
TGG
Pro
>WENV086256
BABE01018307
159159
Actinomycetota
TGG
Pro
>WENV086140
BABE01008749
161068
Actinomycetota
>WENV086175
BABE01011652
161068
Actinomycetota
>WENV086268
BABE01020177
161068
Actinomycetota
>WENV085988
BABE01000154
125238
Actinomycetota
TAG
Leu
>WENV086012
BABE01000377
125238
Actinomycetota
TAG
Leu
>WENV086107
BABE01005562
125238
Actinomycetota
TAG
Leu
>WENV086003
BABE01000239
257438
Actinomycetota
TAA
Leu
>WENV086049
BABE01001300
181635
Actinomycetota
GAA
Phe
>WENV085985
BABE01000142
169995
Actinomycetota
GGG
Pro
>WENV086098
BABE01003190
169995
Actinomycetota
GGG
Pro
>WENV086048
BABE01001264
368995
Actinomycetota
CAT
Met
>WENV085950
BABE01000005
448231
Actinomycetota
CCC
Gly
>WENV086095
BABE01003090
448231
Actinomycetota
CCC
Gly
>WENV086046
BABE01001264
124588
Actinomycetota
GTA
Tyr
>WENV086045
BABE01001244
158580
Actinomycetota
TAC
Val
>WENV086054
BABE01001488
282070
Actinomycetota
ACG
Arg
>WENV085987
BABE01000152
257872
Actinomycetota
CGT
Thr
>WENV086255
BABE01018281
257872
Actinomycetota
CGT
Thr
>WENV086084
BABE01002546
257215
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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