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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086101
BABE01003999
162496
Bacillota
TCT
Arg
>WENV086085
BABE01002629
261552
Bacillota
CTT
Lys
>WENV086024
BABE01000470
124824
Bacillota
GTA
Tyr
>WENV086022
BABE01000470
311396
Bacillota
TAC
Val
>WENV086196
BABE01013192
64786
Bacillota
CAA
Leu
>WENV086041
BABE01001085
369774
Bacillota
GGT
Thr
>WENV086009
BABE01000259
449081
Bacillota
GCA
Cys
>WENV086090
BABE01002861
159872
Bacillota
GAT
Ile
>WENV086057
BABE01001526
378277
Bacillota
CTC
Glu
>WENV086044
BABE01001237
277996
Bacillota
TTC
Glu
>WENV086074
BABE01001805
159318
Bacillota
CGG
Pro
>WENV086066
BABE01001685
49778
Bacillota
AAG
Leu
>WENV086067
BABE01001741
310065
Bacillota
GAA
Phe
>WENV086086
BABE01002675
54030
Bacillota
GGA
Ser
>WENV086043
BABE01001206
158271
Bacillota
CCT
Arg
>WENV086076
BABE01001867
371273
Bacillota
CGT
Thr
>WENV086025
BABE01000470
261400
Bacillota
TTG
Gln
>WENV086070
BABE01001741
160475
Bacillota
CAT
Met
>WENV086082
BABE01002296
12057
Bacillota
CGA
Ser
>WENV086013
BABE01000383
187922
Bacillota
CCG
Arg
>WENV086096
BABE01003105
88877
Bacillota
CAG
Leu
>WENV086078
BABE01001947
448614
Bacillota
CCA
Trp
>WENV086026
BABE01000470
259318
Bacillota
TTT
Lys
>WENV086060
BABE01001588
112135
Bacillota
GTA
Tyr
>WENV086170
BABE01011357
112135
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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