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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086898
BABG01021178
65532
Bacillota
CAA
Leu
>WENV086814
BABG01011396
258855
Bacillota
CTT
Lys
>WENV086740
BABG01006105
261392
Bacillota
GAA
Phe
>WENV086839
BABG01013097
89754
Bacillota
GTA
Tyr
>WENV086630
BABG01000758
371352
Bacillota
CTC
Glu
>WENV086922
BABG01024520
71766
Bacillota
CAG
Leu
>WENV086732
BABG01005899
159235
Bacillota
GTC
Asp
>WENV086917
BABG01022694
159235
Bacillota
GTC
Asp
>WENV086719
BABG01004802
261394
Bacillota
CCG
Arg
>WENV086855
BABG01014307
162485
Bacillota
CAT
Met
>WENV086672
BABG01002694
371351
Bacillota
CCA
Trp
>WENV086734
BABG01005899
257968
Bacillota
GCC
Gly
>WENV086625
BABG01000612
88717
Bacillota
GTA
Tyr
>WENV086797
BABG01009903
88717
Bacillota
GTA
Tyr
>WENV086733
BABG01005899
257970
Bacillota
GAA
Phe
>WENV086959
BABG01033000
159454
Bacillota
GGG
Pro
>WENV086645
BABG01001317
257963
Bacillota
>WENV086701
BABG01003660
393129
Bacillota
CTC
Glu
>WENV086656
BABG01001882
258854
Bacillota
TGC
Ala
>WENV086864
BABG01015882
258854
Bacillota
TGC
Ala
>WENV086842
BABG01013208
159318
Bacillota
CGG
Pro
>WENV086696
BABG01003506
124618
Bacillota
GAG
Leu
>WENV086953
BABG01030540
124618
Bacillota
GAG
Leu
>WENV086658
BABG01002031
449103
Bacillota
GCA
Cys
>WENV086554
BABG01000033
286917
Bacillota
TGC
Ala
>WENV086649
BABG01001441
286917
Bacillota
TGC
Ala
>WENV086684
BABG01003157
286917
Bacillota
TGC
Ala
>WENV086694
BABG01003387
286917
Bacillota
TGC
Ala
>WENV086811
BABG01011326
286917
Bacillota
TGC
Ala
>WENV086759
BABG01007107
448255
Bacillota
CTG
Gln
>WENV086856
BABG01014323
448255
Bacillota
CTG
Gln
>WENV086595
BABG01000186
159234
Bacillota
CAC
Val
>WENV086778
BABG01008494
159234
Bacillota
CAC
Val
>WENV086893
BABG01020390
159234
Bacillota
CAC
Val
>WENV086872
BABG01016536
124820
Bacillota
TAG
Leu
>WENV086553
BABG01000033
159433
Bacillota
GAT
Ile
>WENV086714
BABG01004347
162487
Bacillota
CGG
Pro
>WENV086861
BABG01015333
261495
Bacillota
CTT
Lys
>WENV086671
BABG01002645
159237
Bacillota
TCT
Arg
>WENV086703
BABG01003900
159237
Bacillota
TCT
Arg
>WENV086826
BABG01012486
259855
Bacillota
GTT
Asn
>WENV086638
BABG01001107
257977
Bacillota
CGT
Thr
>WENV086754
BABG01006710
105206
Bacillota
GTA
Tyr
>WENV086683
BABG01003044
261284
Bacillota
CTT
Lys
>WENV086912
BABG01022425
371263
Bacillota
TTG
Gln
>WENV086559
BABG01000033
189541
Bacillota
GTC
Asp
>WENV086578
BABG01000088
189541
Bacillota
GTC
Asp
>WENV086894
BABG01020439
189541
Bacillota
GTC
Asp
>WENV086833
BABG01012486
105931
Bacillota
GTA
Tyr
>WENV086640
BABG01001200
158271
Bacillota
CCT
Arg
>WENV086576
BABG01000081
369393
Bacillota
TTC
Glu
>WENV086946
BABG01029349
369393
Bacillota
TTC
Glu
>WENV086887
BABG01018802
50190
Bacillota
AAG
Leu
>WENV086648
BABG01001441
166292
Bacillota
GAT
Ile
>WENV086722
BABG01005024
166292
Bacillota
GAT
Ile
>WENV086812
BABG01011326
166292
Bacillota
GAT
Ile
>WENV086620
BABG01000567
11993
Bacillota
GGA
Ser
>WENV086699
BABG01003656
49796
Bacillota
TGA
Ser
>WENV086700
BABG01003656
5393
Bacillota
GCT
Ser
>WENV086877
BABG01017252
67413
Bacillota
CAG
Leu
>WENV086794
BABG01009600
175276
Bacillota
CGG
Pro
>WENV086928
BABG01025501
448256
Bacillota
TTG
Gln
>WENV086915
BABG01022500
182424
Bacillota
CAT
Met
>WENV086916
BABG01022685
261310
Bacillota
CGT
Thr
>WENV086698
BABG01003578
18326
Bacillota
CGA
Ser
>WENV086571
BABG01000051
258102
Bacillota
TGC
Ala
>WENV086584
BABG01000108
258102
Bacillota
TGC
Ala
>WENV086608
BABG01000480
258102
Bacillota
TGC
Ala
>WENV086651
BABG01001611
258102
Bacillota
TGC
Ala
>WENV086663
BABG01002368
258102
Bacillota
TGC
Ala
>WENV086567
BABG01000042
190198
Bacillota
>WENV086563
BABG01000042
131046
Bacillota
TAG
Leu
>WENV086831
BABG01012486
293658
Bacillota
TAC
Val
>WENV086580
BABG01000088
312418
Bacillota
GAA
Phe
>WENV086793
BABG01009600
12392
Bacillota
GGA
Ser
>WENV086566
BABG01000042
162489
Bacillota
GTC
Asp
>WENV086745
BABG01006105
162489
Bacillota
GTC
Asp
>WENV086677
BABG01002735
159236
Bacillota
GTT
Asn
>WENV086728
BABG01005434
257976
Bacillota
CCC
Gly
>WENV086927
BABG01024882
257976
Bacillota
CCC
Gly
>WENV086637
BABG01001034
162486
Bacillota
GAT
Ile
>WENV086667
BABG01002505
162486
Bacillota
GAT
Ile
>WENV086572
BABG01000051
159345
Bacillota
GAT
Ile
>WENV086583
BABG01000108
159345
Bacillota
GAT
Ile
>WENV086607
BABG01000480
159345
Bacillota
GAT
Ile
>WENV086652
BABG01001611
159345
Bacillota
GAT
Ile
>WENV086925
BABG01024671
89161
Bacillota
CAA
Leu
>WENV086735
BABG01005899
369392
Bacillota
GCA
Cys
>WENV086702
BABG01003674
257965
Bacillota
TGG
Pro
>WENV086815
BABG01011548
257965
Bacillota
TGG
Pro
>WENV086633
BABG01000858
64855
Bacillota
CAG
Leu
>WENV086758
BABG01007090
64855
Bacillota
CAG
Leu
>WENV086769
BABG01007218
64855
Bacillota
CAG
Leu
>WENV086780
BABG01008609
64855
Bacillota
CAG
Leu
>WENV086878
BABG01017300
64855
Bacillota
CAG
Leu
>WENV086897
BABG01020664
64855
Bacillota
CAG
Leu
>WENV086838
BABG01013097
262082
Bacillota
TGT
Thr
>WENV086910
BABG01022425
162488
Bacillota
TCT
Arg
>WENV086670
BABG01002645
159238
Bacillota
GTG
His
>WENV086704
BABG01003900
159238
Bacillota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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