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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170020166
BBPE01003583
209185
Alphaproteobacteria
CCA
Trp
>WENV170020207
BBPE01004112
108999
Alphaproteobacteria
TAG
Leu
>WENV170019809
BBPE01000715
19056
Alphaproteobacteria
GGA
Ser
>WENV170020197
BBPE01003950
19056
Alphaproteobacteria
GGA
Ser
>WENV170020198
BBPE01003950
19056
Alphaproteobacteria
GGA
Ser
>WENV170020723
BBPE01020807
369745
Alphaproteobacteria
CAC
Val
>WENV170020081
BBPE01002804
167149
Alphaproteobacteria
CCT
Arg
>WENV170020213
BBPE01004243
167149
Alphaproteobacteria
CCT
Arg
>WENV170020672
BBPE01017557
167149
Alphaproteobacteria
CCT
Arg
>WENV170019743
BBPE01000400
298571
Alphaproteobacteria
CTC
Glu
>WENV170020429
BBPE01007732
397391
Alphaproteobacteria
TAC
Val
>WENV170020524
BBPE01010430
236538
Alphaproteobacteria
GAT
Ile
>WENV170020676
BBPE01017743
26352
Alphaproteobacteria
GGA
Ser
>WENV170020282
BBPE01005307
275379
Alphaproteobacteria
CGC
Ala
>WENV170020402
BBPE01007042
124751
Alphaproteobacteria
CAA
Leu
>WENV170019750
BBPE01000466
172838
Alphaproteobacteria
ACG
Arg
>WENV170020472
BBPE01008758
371032
Alphaproteobacteria
CAC
Val
>WENV170019821
BBPE01000773
160734
Alphaproteobacteria
GTC
Asp
>WENV170019715
BBPE01000204
370022
Alphaproteobacteria
GTT
Asn
>WENV170020187
BBPE01003898
370022
Alphaproteobacteria
GTT
Asn
>WENV170019681
BBPE01000046
259409
Alphaproteobacteria
GAA
Phe
>WENV170020386
BBPE01006879
458654
Alphaproteobacteria
CTG
Gln
>WENV170020718
BBPE01020644
159808
Alphaproteobacteria
ACG
Arg
>WENV170020129
BBPE01003229
205695
Alphaproteobacteria
GGG
Pro
>WENV170020176
BBPE01003752
205695
Alphaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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