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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170020095
BBPE01002888
271342
Betaproteobacteria
TGT
Thr
>WENV170019815
BBPE01000728
478395
Betaproteobacteria
GCA
Cys
>WENV170019906
BBPE01001340
478395
Betaproteobacteria
GCA
Cys
>WENV170020309
BBPE01005589
474654
Betaproteobacteria
GCA
Cys
>WENV170019917
BBPE01001419
8103
Betaproteobacteria
GCT
Ser
>WENV170019808
BBPE01000709
121145
Betaproteobacteria
GAG
Leu
>WENV170019950
BBPE01001759
97839
Betaproteobacteria
GTA
Tyr
>WENV170020088
BBPE01002819
97839
Betaproteobacteria
GTA
Tyr
>WENV170020189
BBPE01003916
170679
Betaproteobacteria
TTG
Gln
>WENV170019895
BBPE01001231
211438
Betaproteobacteria
CAT
Met
>WENV170019934
BBPE01001609
171167
Betaproteobacteria
TCT
Arg
>WENV170020102
BBPE01002913
171167
Betaproteobacteria
TCT
Arg
>WENV170020114
BBPE01003021
171167
Betaproteobacteria
TCT
Arg
>WENV170019919
BBPE01001437
115137
Betaproteobacteria
CAA
Leu
>WENV170020066
BBPE01002603
452007
Betaproteobacteria
GCA
Cys
>WENV170019828
BBPE01000816
271027
Betaproteobacteria
CTT
Lys
>WENV170020214
BBPE01004256
167755
Betaproteobacteria
TTG
Gln
>WENV170019918
BBPE01001437
261323
Betaproteobacteria
CGT
Thr
>WENV170019939
BBPE01001647
260287
Betaproteobacteria
TTC
Glu
>WENV170019941
BBPE01001705
257521
Betaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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